| MirGeneDB ID | Dsi-Mir-306 |
|---|
| Family name |
MIR-306 (all species) |
|---|
| Seed |
CAGGUAC |
|---|
| Species |
Fruit fly (Drosophila simulans) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Aae-Mir-306
Bge-Mir-306
Dan-Mir-306
Dme-Mir-306
Dmo-Mir-306
Dya-Mir-306
Hme-Mir-306
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel) |
2L: 16226178-16226236 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGUGAAUAGUUUAAAAGUCCACUCGAUGGCUCAGGUACUUAGUGACUCUCAAUGCCUUUGACAUUUUGGGGGUCACUCUGUGCCUGUGCUGCCAGUGGGACAUAAUCUACAAAUAAAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGUGAAUAGUUUAAAAG---| CGA U UU UGCCUU
UCCACU UGGC CAGGUAC AGUGACUCUCAA \
GGGUGA GUCG GUCCGUG UCACUGGGGGUU U
UGAAAUAAACAUCUAAUACA^ CC- U UC UUACAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Dsi-Mir-306_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCAGGUACUUAGUGACUCUCAA -22
Get sequence
|
|---|
| Star sequence |
Dsi-Mir-306_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- GGGGGUCACUCUGUGCCUGUGC -59
Get sequence
|
|---|
