MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-9-P11

Family name MIR-9 (all species)
Seed CUUUGGU
Species Fruit fly (Drosophila simulans)
MiRBase ID
Paralogues Dsi-Mir-9-P9  Dsi-Mir-9-P10  Dsi-Mir-9-P12-v1  Dsi-Mir-9-P12-v2  Dsi-Mir-9-P13 
Orthologues Aae-Mir-9-P11  Bfl-Mir-9  Bge-Mir-9-o11-v1  Bge-Mir-9-o11-v2  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P11  Dme-Mir-9-P11  Dmo-Mir-9-P11  Dya-Mir-9-P11  Esc-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Npo-Mir-9  Obi-Mir-9  Ovu-Mir-9  Pmi-Mir-9  Spu-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Diptera
Node of Origin (family) Bilateria
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2L: 16225666-16225735 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCUUGCACUAUUUAUCAUUUUUGCUGUUUCUUUGGUAUUCUAGCUGUAGAUUGUUUCACGCACAUUGUAUAUCAUCUAAAGCUUUUAUACCAAAGCUCCAGCUUAAAUUGCUUAACAACGCACCAACC
Get precursor sequence
Structure
        10          20        30        40        50        60    
CCUCUUGCACUAUUUAUC--|   UU    UUU         UCU    G    UUGUUUCACGC 
                    AUUU  GCUG   CUUUGGUAU   AGCU UAGA           A
                    UAAA  CGAC   GAAACCAUA   UCGA AUCU           C
CCAACCACGCAACAAUUCGU^   UU    CUC         UUU    A    ACUAUAUGUUA 
.       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Mature sequence

Dsi-Mir-9-P11_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUAUUCUAGCUGUAGA -22
Get sequence
Star sequence

Dsi-Mir-9-P11_3p*
mirBase accessionNone
Sequence 
48- UAAAGCUUUUAUACCAAAGCUC -70
Get sequence