MirGeneDB ID | Dsi-Mir-9-P12-v2 |
Family name |
MIR-9 (all species) |
Seed |
UAAAGCU |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
|
Paralogues |
Dsi-Mir-9-P9
Dsi-Mir-9-P10
Dsi-Mir-9-P11
Dsi-Mir-9-P12-v1
Dsi-Mir-9-P13
|
Orthologues |
Aae-Mir-9-P12-v1
Aae-Mir-9-P12-v2
Bfl-Mir-9
Bge-Mir-9-o12
Bla-Mir-9
Bpl-Mir-9
Cin-Mir-9
Cte-Mir-9
Dan-Mir-9-P12-v1
Dan-Mir-9-P12-v2
Dme-Mir-9-P12-v1
Dme-Mir-9-P12-v2
Dmo-Mir-9-P12-v1
Dmo-Mir-9-P12-v2
Dya-Mir-9-P12-v1
Dya-Mir-9-P12-v2
Esc-Mir-9
Isc-Mir-9
Lan-Mir-9
Lgi-Mir-9
Npo-Mir-9
Obi-Mir-9
Ovu-Mir-9
Pmi-Mir-9
Spu-Mir-9
Xbo-Mir-9
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Bilateria
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
2L: 16226326-16226388 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGUGCCUCAGAGUGUAGCUGACUUACCAUUGCUUUGGCGCUUUAGCUGUAUGAUAGAUUUAAACUACUUCAUAAAGCUAGAUUACCAAAGCAUUGGCUUGUGCAGAUCAAUCGUCGGAAACAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGUGCCUCAGAGUGUAG- -| UUA U CGC G UAGAUUU
CUG AC CCA UGCUUUGG UUUAGCU UAUGA \
GAC UG GGU ACGAAACC AGAUCGA AUACU A
AACAAAGGCUGCUAACUA G^ UUC U AUU A UCAUCAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dsi-Mir-9-P12-v2_5p* |
mirBase accession | None |
Sequence |
0- GCUUUGGCGCUUUAGCUGUAUGA -23
Get sequence
|
Mature sequence |
Dsi-Mir-9-P12-v2_3p |
mirBase accession | None |
Sequence |
40- AUAAAGCUAGAUUACCAAAGCAU -63
Get sequence
|