MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-9-P12

Family name MIR-9 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-79
Paralogues Hme-Mir-9-P9  Hme-Mir-9-P10  Hme-Mir-9-P11 
Orthologues Aae-Mir-9-P12-v1  Aga-Mir-9-P12  Agr-Mir-9  Bfl-Mir-9  Bge-Mir-9-P12-v1  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P12-v1  Dgr-Mir-9  Dlo-Mir-9-P12-v1  Dme-Mir-9-P12-v1  Dmo-Mir-9-P12-v1  Dsi-Mir-9-P12-v1  Dya-Mir-9-P12-v1  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gpa-Mir-9-P12-v1  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  Tca-Mir-9-P12  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Hmel_1)		 HE669612: 9693-9752 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-9-P12)		 Mir-9-P12 HE669612: 9693-9752 [-] Ensembl
Mir-306 HE669612: 9837-9892 [-] Ensembl
Mir-9-P11 HE669612: 10319-10377 [-] Ensembl
Seed UAAAGCU
Precursor
(pre-Mir +30nt flank)		 
ACGUGACUCGACGCGACGCACGAUGCGACGCUUUGGCGAUUUAGCUCCAUGACGUUGCGUGUAUGCUCAUAAAGCUAGAUUACCAAAGCAUCGCGUCGAUGCAAAUAUCAUCAGAAGACA
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Structure
        10         20         30        40        50         
ACGUGACUCGACGCGAC-   -|       C       CG        CC    CGUUGC 
                  GCA CGAUGCGA GCUUUGG  AUUUAGCU  AUGA      G
                  CGU GCUGCGCU CGAAACC  UAGAUCGA  UACU      U
ACAGAAGACUACUAUAAA   A^       A       AU        AA    CGUAUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-9-P12_5p*
mirBase accessionNone
Sequence 
0- CUUUGGCGAUUUAGCUCCAUGA -22
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Mature sequence

Hme-Mir-9-P12_3p
mirBase accessionMIMAT0024987
Sequence 
38- AUAAAGCUAGAUUACCAAAGCA -60
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