MirGeneDB 3.0
257 microRNA genes with seed CUUUGGU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Agr-Mir-9 None MIR-9 CUUUGGU None None JABBOT010000005.1 29577699 29577760 + Bilateria Bilateria No 1
Bfl-Mir-9 bfl-mir-9-1 MIR-9 CUUUGGU MIMAT0009465 None NC_049980.1 2517235 2517295 - Bilateria Bilateria Unknown 1 1
Bla-Mir-9 None MIR-9 CUUUGGU None None Sc0000019 2253989 2254048 + Bilateria Bilateria No 1 1
Cin-Mir-9 cin-mir-9 MIR-9 CUUUGGU MIMAT0016396 None 5 4897034 4897089 + Bilateria Bilateria No 1
Cte-Mir-9 cte-mir-9 MIR-9 CUUUGGU MIMAT0009508 MIMAT0009554 CAPTEscaffold_250 129678 129738 + Bilateria Bilateria Unknown 1
Dgr-Mir-9 None MIR-9 CUUUGGU None None CAJFCJ010000014.1 354674 354734 + Bilateria Bilateria Unknown 1 1
Eba-Mir-9 None MIR-9 CUUUGGU None None WURV02196146.1 2621 2682 + Bilateria Bilateria No 1 1
Egr-Mir-9 egr-mir-9 MIR-9 CUUUGGU MIMAT0020235 MIMAT0037423 APAU02000235.1 50918 50991 + Bilateria Bilateria No 1
Esc-Mir-9 None MIR-9 CUUUGGU None None CM044491.1 123669224 123669285 + Bilateria Bilateria No 1
Gsa-Mir-9 gsa-mir-9 MIR-9 CUUUGGU MIMAT0035288 MIMAT0035289 scf7180006949357 9043 9143 + Bilateria Bilateria No 1 1
Gsp-Mir-9 None MIR-9 CUUUGGU None None OX940783.1 33225885 33226082 - Bilateria Bilateria Unknown 1
Hru-Mir-9 None MIR-9 CUUUGGU None None JALGQA010000001.1 86779108 86779169 + Bilateria Bilateria No 1
Isc-Mir-9 isc-mir-79 MIR-9 CUUUGGU None MIMAT0012705 NW_024609837.1 34341070 34341129 + Bilateria Bilateria No 1 1
Lan-Mir-9 None MIR-9 CUUUGGU None None LFEI01000577 180183 180243 + Bilateria Bilateria Unknown 1
Lgi-Mir-9 lgi-mir-9 MIR-9 CUUUGGU MIMAT0009562 MIMAT0009572 LOTGIsca_14 1751428 1751489 + Bilateria Bilateria No 1
Llo-Mir-9 None MIR-9 CUUUGGU None None OU342993.1 6082207 6082268 + Bilateria Bilateria No 1
Mom-Mir-9 None MIR-9 CUUUGGU None None JARFOD010000029.1 763005 763066 + Bilateria Bilateria No 1
Npo-Mir-9 None MIR-9 CUUUGGU None None JACATO010000367.1 1247889 1247950 - Bilateria Bilateria Unknown 1
Obi-Mir-9 None MIR-9 CUUUGGU None None KQ426847 124230 124291 - Bilateria Bilateria No 1
Ofu-Mir-9 None MIR-9 CUUUGGU None None CAIIXF020000010.1 9267572 9267632 + Bilateria Bilateria No 1
Ovu-Mir-9 None MIR-9 CUUUGGU None None RXHP01026531.1 105328 105389 - Bilateria Bilateria No 1
Pau-Mir-9 None MIR-9 CUUUGGU None None NMRA01000160.1 282399 282458 - Bilateria Bilateria No 1
Pdu-Mir-9 None MIR-9 CUUUGGU None None JAPTHN010000001.1 38229932 38229992 + Bilateria Bilateria No 1 1
Pmi-Mir-9 pmi-mir-9 MIR-9 CUUUGGU MIMAT0032142 None JH769648.1 36031 36093 + Bilateria Bilateria No 1
Pve-Mir-9 None MIR-9 CUUUGGU None None Pve_Chr6 438755499 438755559 + Bilateria Bilateria No 1
Rph-Mir-9 None MIR-9 CUUUGGU None None CM018526.1 11142109 11142170 + Bilateria Bilateria No 1
Sma-Mir-9 None MIR-9 CUUUGGU None None HE601627.3 25734003 25734099 + Bilateria Bilateria Unknown 1
Snu-Mir-9 None MIR-9 CUUUGGU None None CM049313.1 46692645 46692704 - Bilateria Bilateria No 1 1
Spu-Mir-9 spu-mir-9 MIR-9 CUUUGGU MIMAT0009653 MIMAT0009661 AAGJ06000009.1 10964608 10964669 + Bilateria Bilateria No 1 1
War-Mir-9 None MIR-9 CUUUGGU None None WNLI01165372.1 1191 1252 + Bilateria Bilateria No 1
Xbo-Mir-9 None MIR-9 CUUUGGU None None scaffold1423 24861 24921 - Bilateria Bilateria No 1
Pfl-Mir-9 V None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria 2 No 1 1
Sko-Mir-9 V sko-mir-9 MIR-9 CUUUGGU MIMAT0009610 MIMAT0009618 NW_003125887.1 164505 164564 - Bilateria Bilateria 2 No 1 1
Pma-Mir-9-o1 pma-mir-9a-1 MIR-9 CUUUGGU MIMAT0019373 None NC_046108.1 4385189 4385250 + P. marinus Bilateria Unknown 1
Pma-Mir-9-o2 pma-mir-9a-2 MIR-9 CUUUGGU MIMAT0019373 MIMAT0019374 NC_046069.1 28947955 28948015 + P. marinus Bilateria No 1
Pma-Mir-9-o3 None MIR-9 CUUUGGU None None NC_046081.1 4287212 4287271 - P. marinus Bilateria No
Pma-Mir-9-o4 None MIR-9 CUUUGGU None None NC_046120.1 4110016 4110075 + P. marinus Bilateria No
Pma-Mir-9-o5 None MIR-9 CUUUGGU None None NC_046125.1 5636174 5636237 + P. marinus Bilateria No 1 1
Asu-Mir-9-o17 asu-mir-9 MIR-9 CUUUGGU MIMAT0021431 MIMAT0021432 Scaffold703 302189 302252 + A.suum Bilateria No
Aca-Mir-9-P1 aca-mir-9-2 MIR-9 CUUUGGU MIMAT0021990 None GL343444.1 370606 370667 + Gnathostomata Bilateria No 1 1
Ami-Mir-9-P1 ami-mir-9-3 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017713709.1 12355229 12355290 + Gnathostomata Bilateria No 1 1
Bta-Mir-9-P1 bta-mir-9-1 MIR-9 CUUUGGU None MIMAT0012549 NC_037348.1 20839142 20839203 + Gnathostomata Bilateria No 1 1
Cfa-Mir-9-P1 cfa-mir-9-3 MIR-9 CUUUGGU MIMAT0006674 None chr3 52410840 52410901 + Gnathostomata Bilateria No 1 1
Cja-Mir-9-P1 None MIR-9 CUUUGGU None None CM021920.1 16807811 16807872 + Gnathostomata Bilateria Unknown 1 1
Cmi-Mir-9-P1 None MIR-9 CUUUGGU None None KI636065.1 729079 729138 - Gnathostomata Bilateria No 1
Cpi-Mir-9-P1 cpi-mir-9-3 MIR-9 CUUUGGU MIMAT0037622 MIMAT0037623 JH584649 9602582 9602643 + Gnathostomata Bilateria No 1 1
Cpo-Mir-9-P1 cpo-mir-9-3 MIR-9 CUUUGGU MIMAT0046843 MIMAT0046844 scaffold_10 34662883 34662944 - Gnathostomata Bilateria No 1 1
Dno-Mir-9-P1 dno-mir-9-3 MIR-9 CUUUGGU MIMAT0047495 MIMAT0047496 JH566228 425109 425170 - Gnathostomata Bilateria No 1 1
Eca-Mir-9-P1 None MIR-9 CUUUGGU None None CM009148.1 94880169 94880230 - Gnathostomata Bilateria No 1 1
Ete-Mir-9-P1 None MIR-9 CUUUGGU None None JH980334 17366920 17366981 + Gnathostomata Bilateria No 1 1
Gga-Mir-9-P1 gga-mir-9-3 MIR-9 CUUUGGU MIMAT0001195 None 10 13375349 13375410 - Gnathostomata Bilateria No 1 1
Gja-Mir-9-P1 None MIR-9 CUUUGGU None None NW_015162011.1 108925 108986 + Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P1 hsa-mir-9-3 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr15 89368032 89368093 + Gnathostomata Bilateria No 1 1
Laf-Mir-9-P1 None MIR-9 CUUUGGU None None GL010055.1 17592787 17592848 - Gnathostomata Bilateria Unknown 1 1
Lch-Mir-9-P1 None MIR-9 CUUUGGU None None JH126611.1 2302489 2302550 - Gnathostomata Bilateria Unknown 1 1
Loc-Mir-9-P1 None MIR-9 CUUUGGU None None LG3 56190417 56190478 + Gnathostomata Bilateria No 1 1
Mdo-Mir-9-P1 mdo-mir-9a-1 MIR-9 CUUUGGU MIMAT0004087 MIMAT0004088 1 122711583 122711644 - Gnathostomata Bilateria No 1 1
Mml-Mir-9-P1 mml-mir-9-3 MIR-9 CUUUGGU MIMAT0006160 MIMAT0031078 CM014342.1 68144469 68144530 + Gnathostomata Bilateria No 1 1
Mmr-Mir-9-P1 None MIR-9 CUUUGGU None None CM007669.1 107798142 107798203 + Gnathostomata Bilateria Unknown 1 1
Mmu-Mir-9-P1 mmu-mir-9-3 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr7 79505279 79505340 + Gnathostomata Bilateria No 1 1
Mun-Mir-9-P1 None MIR-9 CUUUGGU None None LR594632.1 736998934 736998995 + Gnathostomata Bilateria No 1 1
Oan-Mir-9-P1 None MIR-9 CUUUGGU None None NC_041732.1 21919514 21919575 + Gnathostomata Bilateria No 1 1
Ocu-Mir-9-P1 None MIR-9 CUUUGGU None None 1937863118 362 423 - Gnathostomata Bilateria No 1 1
Pab-Mir-9-P1 None MIR-9 CUUUGGU None None CM054695.2 92449932 92449993 + Gnathostomata Bilateria No 1 1
Pbv-Mir-9-P1 pbv-mir-9-3 MIR-9 CUUUGGU MIMAT0038821 MIMAT0038822 KE955498.1 5679 5740 + Gnathostomata Bilateria No 1 1
Rno-Mir-9-P1 rno-mir-9a-3 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr1 141229368 141229429 + Gnathostomata Bilateria No 1 1
Sha-Mir-9-P1 None MIR-9 CUUUGGU None None GL834472.1 1703520 1703581 - Gnathostomata Bilateria No 1 1
Spt-Mir-9-P1 None MIR-9 CUUUGGU None None QEPC01014402.1 10342911 10342972 - Gnathostomata Bilateria Unknown 1 1
Sto-Mir-9-P1 None MIR-9 CUUUGGU None None BFAA01002459.1 249955 250016 + Gnathostomata Bilateria No 1
Tgu-Mir-9-P1 tgu-mir-9-1 MIR-9 CUUUGGU MIMAT0014502 MIMAT0014627 10 13553459 13553520 - Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P1 xtr-mir-9-3 MIR-9 CUUUGGU MIMAT0003649 MIMAT0003650 chr3 99283857 99283918 + Gnathostomata Bilateria No 1 1
Dre-Mir-9-P1a dre-mir-9-3 MIR-9 CUUUGGU MIMAT0001769 MIMAT0003156 chr25 8551263 8551322 - Clupeocephala Bilateria No
Gmo-Mir-9-P1a gmo-mir-9-7 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044077 GeneScaffold_2213 52396 52457 - Clupeocephala Bilateria No
Mal-Mir-9-P1a None MIR-9 CUUUGGU None None KV884848.1 885527 885587 - Clupeocephala Bilateria No 1
Tni-Mir-9-P1a tni-mir-9-3 MIR-9 CUUUGGU MIMAT0002911 None 13 5474110 5474171 + Clupeocephala Bilateria Unknown 1 1
Dre-Mir-9-P1b dre-mir-9-6 MIR-9 CUUUGGU MIMAT0001769 MIMAT0003156 chr7 14379556 14379617 - Clupeocephala Bilateria No 1 1
Gmo-Mir-9-P1b gmo-mir-9-3 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044218 GeneScaffold_3319 19161 19222 - Clupeocephala Bilateria No 1 1
Mal-Mir-9-P1b None MIR-9 CUUUGGU None None KV884692.1 7597742 7597803 - Clupeocephala Bilateria No 1 1
Tni-Mir-9-P1b None MIR-9 CUUUGGU None None 5 5099964 5100025 + Clupeocephala Bilateria Unknown 1 1
Xla-Mir-9-P1c None MIR-9 CUUUGGU None None NC_030728.1 99731313 99731374 + X. laevis Bilateria No 1 1
Xla-Mir-9-P1d None MIR-9 CUUUGGU None None NC_030729.1 44001647 44001708 - X. laevis Bilateria No 1 1
Aca-Mir-9-P2 aca-mir-9-1 MIR-9 CUUUGGU MIMAT0021990 MIMAT0021991 2 21613005 21613064 - Gnathostomata Bilateria No 1 1
Ami-Mir-9-P2 ami-mir-9-2 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017707593.1 13620894 13620953 - Gnathostomata Bilateria No 1 1
Bta-Mir-9-P2 bta-mir-9-2 MIR-9 CUUUGGU None MIMAT0012549 NC_037334.1 88196018 88196077 - Gnathostomata Bilateria No 1 1
Cfa-Mir-9-P2 cfa-mir-9-2 MIR-9 CUUUGGU MIMAT0006674 None chr3 19997697 19997756 + Gnathostomata Bilateria No 1 1
Cja-Mir-9-P2 None MIR-9 CUUUGGU None None CM021916.1 118926483 118926542 + Gnathostomata Bilateria Unknown 1 1
Cli-Mir-9-P2 cli-mir-9-2 MIR-9 CUUUGGU MIMAT0038401 MIMAT0038402 scaffold114 234187 234246 - Gnathostomata Bilateria No 1 1
Cmi-Mir-9-P2 None MIR-9 CUUUGGU None None KI635881.1 146317 146377 - Gnathostomata Bilateria No 1 1
Cpi-Mir-9-P2 cpi-mir-9-2 MIR-9 CUUUGGU MIMAT0037622 MIMAT0037623 JH584533 3129780 3129839 + Gnathostomata Bilateria No 1 1
Cpo-Mir-9-P2 cpo-mir-9-2 MIR-9 CUUUGGU MIMAT0046843 MIMAT0046844 scaffold_1 16334937 16334996 + Gnathostomata Bilateria No 1 1
Dno-Mir-9-P2 dno-mir-9-2 MIR-9 CUUUGGU MIMAT0047495 MIMAT0047496 JH570378 3465279 3465338 - Gnathostomata Bilateria No 1 1
Eca-Mir-9-P2 eca-mir-9a-2 MIR-9 CUUUGGU MIMAT0012967 None CM009161.1 78864844 78864903 + Gnathostomata Bilateria No 1 1
Ete-Mir-9-P2 None MIR-9 CUUUGGU None None JH980308 10835174 10835233 + Gnathostomata Bilateria No 1 1
Gga-Mir-9-P2 gga-mir-9-2 MIR-9 CUUUGGU MIMAT0001195 None Z 60673644 60673703 + Gnathostomata Bilateria No 1 1
Gja-Mir-9-P2 None MIR-9 CUUUGGU None None NW_015170914.1 388407 388466 - Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P2 hsa-mir-9-2 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr5 88666865 88666924 - Gnathostomata Bilateria No 1 1
Laf-Mir-9-P2 None MIR-9 CUUUGGU None None GL010034.1 93473198 93473257 - Gnathostomata Bilateria Unknown 1 1
Lch-Mir-9-P2 None MIR-9 CUUUGGU None None JH126923.1 939004 939063 + Gnathostomata Bilateria Unknown 1 1
Loc-Mir-9-P2 None MIR-9 CUUUGGU None None LG2 2941810 2941869 + Gnathostomata Bilateria No 1 1
Mdo-Mir-9-P2 mdo-mir-9a-2 MIR-9 CUUUGGU MIMAT0004087 MIMAT0004088 3 215711861 215711920 + Gnathostomata Bilateria No 1 1
Mml-Mir-9-P2 mml-mir-9-2 MIR-9 CUUUGGU MIMAT0006160 MIMAT0026796 CM014341.1 85563747 85563806 - Gnathostomata Bilateria No 1 1
Mmr-Mir-9-P2 None MIR-9 CUUUGGU None None CM007672.1 90620775 90620834 + Gnathostomata Bilateria Unknown 1 1
Mmu-Mir-9-P2 mmu-mir-9-2 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr13 83738821 83738880 + Gnathostomata Bilateria No 1 1
Mun-Mir-9-P2 None MIR-9 CUUUGGU None None LR594633.1 141591832 141591891 - Gnathostomata Bilateria No 1 1
Neu-Mir-9-P2 None MIR-9 CUUUGGU None None CM051816.1 452541213 452541272 + Gnathostomata Bilateria No 1 1
Oan-Mir-9-P2 oan-mir-9-2 MIR-9 CUUUGGU MIMAT0006792 None NC_041728.1 16000538 16000597 + Gnathostomata Bilateria No 1 1
Ocu-Mir-9-P2 ocu-mir-9-2 MIR-9 CUUUGGU MIMAT0048095 MIMAT0048096 chr11 8577704 8577763 - Gnathostomata Bilateria No 1 1
Pab-Mir-9-P2 None MIR-9 CUUUGGU None None CM054683.2 96410410 96410469 - Gnathostomata Bilateria No 1 1
Pbv-Mir-9-P2 pbv-mir-9-2 MIR-9 CUUUGGU MIMAT0038821 MIMAT0038822 KE953277.1 11651 11710 + Gnathostomata Bilateria No 1 1
Rno-Mir-9-P2 rno-mir-9a-2 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr2 11884686 11884745 + Gnathostomata Bilateria No 1 1
Sha-Mir-9-P2 sha-mir-9 MIR-9 CUUUGGU MIMAT0022783 None GL841279.1 926547 926606 + Gnathostomata Bilateria No 1 1
Spt-Mir-9-P2 None MIR-9 CUUUGGU None None QEPC01014630.1 2369426 2369485 + Gnathostomata Bilateria Unknown 1 1
Sto-Mir-9-P2 None MIR-9 CUUUGGU None None BFAA01001536.1 489899 489959 - Gnathostomata Bilateria No 1 1
Tgu-Mir-9-P2 tgu-mir-9-2 MIR-9 CUUUGGU MIMAT0014502 MIMAT0014627 Z 17214960 17215019 + Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P2 xtr-mir-9a-2 MIR-9 CUUUGGU MIMAT0003553 MIMAT0003554 chr1 170225668 170225727 - Gnathostomata Bilateria No 1 1
Dre-Mir-9-P2a dre-mir-9-2 MIR-9 CUUUGGU MIMAT0001769 MIMAT0003156 chr10 43535995 43536054 - Clupeocephala Bilateria No 1 1
Dre-Mir-9-P2b dre-mir-9-5 MIR-9 CUUUGGU MIMAT0001769 MIMAT0003156 chr5 48170110 48170169 - Clupeocephala Bilateria No 1
Gmo-Mir-9-P2b gmo-mir-9-4 MIR-9 CUUUGGU MIMAT0044076 None GeneScaffold_1980 219082 219141 - Clupeocephala Bilateria No 1 1
Mal-Mir-9-P2b None MIR-9 CUUUGGU None None KV884711.1 2100438 2100497 + Clupeocephala Bilateria No 1 1
Tni-Mir-9-P2b tni-mir-9-2 MIR-9 CUUUGGU MIMAT0002911 None 12 2246027 2246086 + Clupeocephala Bilateria Unknown 1 1
Xla-Mir-9-P2c None MIR-9 CUUUGGU None None NC_030724.1 182078649 182078707 + X. laevis Bilateria No 1
Xla-Mir-9-P2d None MIR-9 CUUUGGU None None NC_030725.1 151615023 151615081 + X. laevis Bilateria No 1
Ami-Mir-9-P3 ami-mir-9-1 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017709017.1 781222 781283 + Gnathostomata Bilateria No 1 1
Bta-Mir-9-P3 None MIR-9 CUUUGGU None None NC_037330.1 14409918 14409979 + Gnathostomata Bilateria No 1 1
Cfa-Mir-9-P3 cfa-mir-9-1 MIR-9 CUUUGGU MIMAT0006674 None chr7 41509404 41509465 + Gnathostomata Bilateria No 1 1
Cja-Mir-9-P3 None MIR-9 CUUUGGU None None CM021932.1 10382283 10382344 - Gnathostomata Bilateria Unknown 1 1
Cli-Mir-9-P3 cli-mir-9-1 MIR-9 CUUUGGU MIMAT0038401 MIMAT0038402 scaffold404 120599 120660 - Gnathostomata Bilateria No 1 1
Cpi-Mir-9-P3 cpi-mir-9-1 MIR-9 CUUUGGU MIMAT0037622 MIMAT0037623 JH584965 536050 536111 - Gnathostomata Bilateria No 1 1
Cpo-Mir-9-P3 cpo-mir-9-1 MIR-9 CUUUGGU MIMAT0046843 MIMAT0046844 scaffold_10 16979678 16979739 - Gnathostomata Bilateria No 1 1
Dno-Mir-9-P3 dno-mir-9-1 MIR-9 CUUUGGU MIMAT0047495 MIMAT0047496 JH579858 636262 636323 + Gnathostomata Bilateria No 1 1
Eca-Mir-9-P3 eca-mir-9a MIR-9 CUUUGGU MIMAT0012967 None CM009152.1 38435557 38435618 + Gnathostomata Bilateria No 1 1
Ete-Mir-9-P3 None MIR-9 CUUUGGU None None JH980385 3055613 3055674 - Gnathostomata Bilateria No 1 1
Gga-Mir-9-P3 gga-mir-9-4 MIR-9 CUUUGGU MIMAT0001195 MIMAT0048671 25 2723420 2723481 - Gnathostomata Bilateria No 1 1
Gja-Mir-9-P3 None MIR-9 CUUUGGU None None NW_015170330.1 176780 176841 - Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P3 hsa-mir-9-1 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr1 156420353 156420414 - Gnathostomata Bilateria No 1 1
Laf-Mir-9-P3 None MIR-9 CUUUGGU None None GL010060.1 4879251 4879312 - Gnathostomata Bilateria Unknown 1 1
Lch-Mir-9-P3 None MIR-9 CUUUGGU None None JH127275.1 176116 176177 - Gnathostomata Bilateria Unknown 1
Loc-Mir-9-P3 None MIR-9 CUUUGGU None None LG24 7156882 7156943 - Gnathostomata Bilateria No 1 1
Mdo-Mir-9-P3 mdo-mir-9a-3 MIR-9 CUUUGGU MIMAT0004087 MIMAT0004088 2 191328853 191328914 - Gnathostomata Bilateria No 1 1
Mml-Mir-9-P3 mml-mir-9-1 MIR-9 CUUUGGU MIMAT0006160 MIMAT0026796 CM014336.1 94547920 94547981 + Gnathostomata Bilateria No 1 1
Mmr-Mir-9-P3 None MIR-9 CUUUGGU None None CM007662.1 120323775 120323836 + Gnathostomata Bilateria Unknown 1 1
Mmu-Mir-9-P3 mmu-mir-9-1 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr3 88215613 88215674 + Gnathostomata Bilateria No 1 1
Mun-Mir-9-P3 None MIR-9 CUUUGGU None None LR594645.1 45068513 45068575 - Gnathostomata Bilateria No 1 1
Neu-Mir-9-P3 None MIR-9 CUUUGGU None None CM051814.1 380515657 380515718 - Gnathostomata Bilateria No 1 1
Ocu-Mir-9-P3 ocu-mir-9-1 MIR-9 CUUUGGU MIMAT0048095 MIMAT0048096 chr13 36488233 36488294 + Gnathostomata Bilateria No 1 1
Pab-Mir-9-P3 None MIR-9 CUUUGGU None None CM054679.2 94170821 94170882 + Gnathostomata Bilateria No 1 1
Pbv-Mir-9-P3 pbv-mir-9-1 MIR-9 CUUUGGU MIMAT0038821 MIMAT0038822 KE964242.1 3424 3485 + Gnathostomata Bilateria No 1 1
Rno-Mir-9-P3 rno-mir-9a-1 MIR-9 CUUUGGU MIMAT0000781 MIMAT0004708 chr2 187582814 187582875 + Gnathostomata Bilateria No 1 1
Sha-Mir-9-P3 None MIR-9 CUUUGGU None None GL856822.1 1577136 1577197 - Gnathostomata Bilateria No 1 1
Spt-Mir-9-P3 None MIR-9 CUUUGGU None None QEPC01015423.1 5228264 5228325 + Gnathostomata Bilateria Unknown 1 1
Tgu-Mir-9-P3 None MIR-9 CUUUGGU None None 25 636046 636107 + Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P3 xtr-mir-9a-1 MIR-9 CUUUGGU MIMAT0003553 MIMAT0003554 chr8 111349809 111349870 + Gnathostomata Bilateria No 1 1
Oan-Mir-9-P3 V None MIR-9 CUUUGGU None None NC_041753.1 164722 164782 - Gnathostomata Bilateria 1 No 1
Dre-Mir-9-P3a dre-mir-9-1 MIR-9 CUUUGGU MIMAT0001769 MIMAT0003156 chr16 29216288 29216349 + Clupeocephala Bilateria No 1 1
Gmo-Mir-9-P3a gmo-mir-9-2 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044077 GeneScaffold_416 111103 111164 - Clupeocephala Bilateria No 1 1
Mal-Mir-9-P3a None MIR-9 CUUUGGU None None KV884877.1 1408999 1409060 - Clupeocephala Bilateria No 1 1
Tni-Mir-9-P3a None MIR-9 CUUUGGU None None Un_random 34480108 34480169 - Clupeocephala Bilateria Unknown 1 1
Gmo-Mir-9-P3b gmo-mir-9-1 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044077 contig74416 161 222 + Clupeocephala Bilateria No 1
Mal-Mir-9-P3b None MIR-9 CUUUGGU None None KV884722.1 2516689 2516750 - Clupeocephala Bilateria No 1 1
Tni-Mir-9-P3b tni-mir-9-1 MIR-9 CUUUGGU MIMAT0002911 None 21_random 1842694 1842755 + Clupeocephala Bilateria Unknown 1
Xla-Mir-9-P3c None MIR-9 CUUUGGU None None NC_030738.1 109009154 109009215 + X. laevis Bilateria No 1 1
Xla-Mir-9-P3d None MIR-9 CUUUGGU None None NC_030739.1 93000179 93000240 + X. laevis Bilateria No 1 1
Aca-Mir-9-P4 aca-mir-9-3 MIR-9 CUUUGGU MIMAT0021990 MIMAT0021992 G889P613971RN1 310 369 - Gnathostomata Bilateria No 1 1
Ami-Mir-9-P4 ami-mir-9-4 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038029 NW_017713014.1 4857 4916 + Gnathostomata Bilateria No 1 1 1
Cli-Mir-9-P4 cli-mir-9-3 MIR-9 CUUUGGU MIMAT0038401 MIMAT0038403 scaffold194 244986 245045 + Gnathostomata Bilateria No 1 1 1
Cmi-Mir-9-P4 None MIR-9 CUUUGGU None None KI635918.1 2272447 2272507 + Gnathostomata Bilateria No 1 1
Cpi-Mir-9-P4 cpi-mir-9-4 MIR-9 CUUUGGU MIMAT0037622 MIMAT0037624 JH584400 2327223 2327282 + Gnathostomata Bilateria No 1 1 1
Gga-Mir-9-P4 gga-mir-9-1 MIR-9 CUUUGGU MIMAT0001195 MIMAT0003350 28 3708403 3708462 + Gnathostomata Bilateria No 1 1 1
Gja-Mir-9-P4 None MIR-9 CUUUGGU None None NW_015162539.1 184322 184381 + Gnathostomata Bilateria No 1 1
Lch-Mir-9-P4 None MIR-9 CUUUGGU None None JH127544.1 777103 777162 - Gnathostomata Bilateria Unknown 1 1
Mun-Mir-9-P4 None MIR-9 CUUUGGU None None LR594642.1 76034570 76034629 + Gnathostomata Bilateria Unknown 1 1
Oan-Mir-9-P4 oan-mir-9-1 MIR-9 CUUUGGU MIMAT0006792 MIMAT0006793 NC_041749.1 114595992 114596051 - Gnathostomata Bilateria No 1 1 1
Pbv-Mir-9-P4 pbv-mir-9-4 MIR-9 CUUUGGU MIMAT0038821 MIMAT0038823 KE954471.1 22811 22870 + Gnathostomata Bilateria No 1 1
Sha-Mir-9-P4 None MIR-9 CUUUGGU None None GL841420.1 1045007 1045065 - Gnathostomata Bilateria No 1 1
Spt-Mir-9-P4 None MIR-9 CUUUGGU None None QEPC01010893.1 4822954 4823013 - Gnathostomata Bilateria Unknown 1 1 1
Sto-Mir-9-P4 None MIR-9 CUUUGGU None None BFAA01002607.1 288230 288290 + Gnathostomata Bilateria No 1
Tgu-Mir-9-P4 None MIR-9 CUUUGGU None None 28 413624 413683 + Gnathostomata Bilateria No 1 1 1
Xtr-Mir-9-P4 xtr-mir-9b MIR-9 CUUUGGU MIMAT0003555 MIMAT0003556 chr1 102034638 102034697 + Gnathostomata Bilateria No 1 1
Dre-Mir-9-P4a dre-mir-9-4 MIR-9 CUUUGGU MIMAT0001769 MIMAT0031932 chr22 18254783 18254842 + Clupeocephala Bilateria No 1 1
Gmo-Mir-9-P4a gmo-mir-9-5 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044161 GeneScaffold_1983 244691 244750 - Clupeocephala Bilateria No 1 1
Mal-Mir-9-P4a None MIR-9 CUUUGGU None None KV884810.1 667688 667747 - Clupeocephala Bilateria No 1
Tni-Mir-9-P4a tni-mir-9-4 MIR-9 CUUUGGU MIMAT0002911 None Un_random 92040539 92040598 + Clupeocephala Bilateria Unknown 1 1
Dre-Mir-9-P4b dre-mir-9-7 MIR-9 CUUUGGU MIMAT0001769 MIMAT0031933 chr2 59102181 59102239 - Clupeocephala Bilateria No 1
Gmo-Mir-9-P4b gmo-mir-9-6 MIR-9 CUUUGGU MIMAT0044076 MIMAT0044235 GeneScaffold_3660 680877 680933 + Clupeocephala Bilateria No 1
Mal-Mir-9-P4b None MIR-9 CUUUGGU None None KV884860.1 398082 398138 + Clupeocephala Bilateria No 1
Tni-Mir-9-P4b None MIR-9 CUUUGGU None None Un_random 105862125 105862181 - Clupeocephala Bilateria No 1
Xla-Mir-9-P4c None MIR-9 CUUUGGU None None NC_030724.1 110894599 110894658 + X. laevis Bilateria No 1 1
Xla-Mir-9-P4d None MIR-9 CUUUGGU None None NW_016694812.1 1485278 1485337 - X. laevis Bilateria No 1 1
Ebu-Mir-9-P5 None MIR-9 CUUUGGU None None FYBX02009325.1 2748770 2748829 + E. burgeri Bilateria No 1
Ebu-Mir-9-P6 None MIR-9 CUUUGGU None None FYBX02009664.1 200543 200602 - E. burgeri Bilateria No 1
Ebu-Mir-9-P7 None MIR-9 CUUUGGU None None FYBX02010532.1 2409350 2409409 + E. burgeri Bilateria No 1 1
Ebu-Mir-9-P8 None MIR-9 CUUUGGU None None FYBX02010665.1 836725 836787 + E. burgeri Bilateria No 1
Dlo-Mir-9-P9 None MIR-9 CUUUGGU None None NC_087241.1 4526129 4526188 - Pancrustacea Bilateria No 1
Dma-Mir-9-P9 None MIR-9 CUUUGGU None None NC_046175.1 6286883 6286941 - Pancrustacea Bilateria No 1
Dpu-Mir-9-P9 None MIR-9 CUUUGGU None None DAPPUscaffold_32 69575 69633 - Pancrustacea Bilateria No 1
Tca-Mir-9-P9a tca-mir-9c MIR-9 CUUUGGU MIMAT0018714 MIMAT0018715 LG3 15689817 15689876 + T. castaneum Bilateria No 1
Tca-Mir-9-P9c V tca-mir-9e MIR-9 CUUUGGU MIMAT0023581 MIMAT0023582 LG9 11087 11146 - T. castaneum Bilateria 2 No 1 1
Aga-Mir-9-P10 aga-mir-9a MIR-9 CUUUGGU MIMAT0001526 None NC_064601.1 84028169 84028230 - Pancrustacea Bilateria No 1 1
Bge-Mir-9-P10 None MIR-9 CUUUGGU None None KZ616519.1 74858 74917 + Pancrustacea Bilateria No 1 1 1
Dan-Mir-9-P10 dan-mir-9a MIR-9 CUUUGGU MIMAT0008458 None scaffold_13337 17332447 17332507 - Pancrustacea Bilateria No 1 1 1
Dlo-Mir-9-P10 None MIR-9 CUUUGGU None None NC_087226.1 7358101 7358162 + Pancrustacea Bilateria No 1 1
Dma-Mir-9-P10 None MIR-9 CUUUGGU None None NC_046179.1 9004931 9004991 - Pancrustacea Bilateria No 1 1 1
Dme-Mir-9-P10 dme-mir-9a MIR-9 CUUUGGU MIMAT0000114 MIMAT0020792 3L 19565140 19565200 + Pancrustacea Bilateria No 1 1
Dmo-Mir-9-P10 dmo-mir-9a MIR-9 CUUUGGU MIMAT0008670 None scaffold_6680 14226522 14226582 - Pancrustacea Bilateria No 1 1
Dpu-Mir-9-P10 dpu-mir-9 MIR-9 CUUUGGU MIMAT0012671 None DAPPUscaffold_2 1526213 1526273 + Pancrustacea Bilateria No 1 1 1
Dsi-Mir-9-P10 dsi-mir-9a MIR-9 CUUUGGU MIMAT0008843 None 3L 19107021 19107081 + Pancrustacea Bilateria No 1 1
Dya-Mir-9-P10 dya-mir-9a MIR-9 CUUUGGU MIMAT0009070 None 3L 20989425 20989485 - Pancrustacea Bilateria No 1 1
Gpa-Mir-9-P10 None MIR-9 CUUUGGU None None Scaffold27 1664994 1665054 - Pancrustacea Bilateria No 1 1
Hme-Mir-9-P10 hme-mir-9b MIR-9 CUUUGGU MIMAT0025002 None HE670875 766577 766635 + Pancrustacea Bilateria No 1
Tca-Mir-9-P10 tca-mir-9a MIR-9 CUUUGGU MIMAT0010090 MIMAT0019177 LGX 6011261 6011324 - Pancrustacea Bilateria No 1 1
Aae-Mir-9-P10a aae-mir-9a-2 MIR-9 CUUUGGU MIMAT0014323 None supercont1.517 574919 574980 + A. aegypti Bilateria No 1 1
Aae-Mir-9-P10b aae-mir-9a-1 MIR-9 CUUUGGU MIMAT0014323 None supercont1.517 555117 555178 + A. aegypti Bilateria No 1 1
Aae-Mir-9-P11 aae-mir-9c MIR-9 CUUUGGU MIMAT0014212 MIMAT0014213 supercont1.785 186231 186302 + Neoptera Bilateria No 1
Aga-Mir-9-P11 aga-mir-9c MIR-9 CUUUGGU MIMAT0001530 None NC_064602.1 5878052 5878119 - Neoptera Bilateria No 1
Bge-Mir-9-P11 None MIR-9 CUUUGGU None None KZ614731.1 672851 672910 - Neoptera Bilateria No 1
Dan-Mir-9-P11 dan-mir-9c MIR-9 CUUUGGU MIMAT0008456 None scaffold_12916 15865484 15865553 - Neoptera Bilateria No 1
Dme-Mir-9-P11 dme-mir-9c MIR-9 CUUUGGU MIMAT0000392 MIMAT0020828 2L 16697936 16698005 + Neoptera Bilateria No
Dmo-Mir-9-P11 dmo-mir-9c MIR-9 CUUUGGU MIMAT0008683 None scaffold_6500 7201357 7201423 + Neoptera Bilateria No 1
Dsi-Mir-9-P11 None MIR-9 CUUUGGU None None 2L 16225666 16225735 + Neoptera Bilateria No 1
Dya-Mir-9-P11 dya-mir-9c MIR-9 CUUUGGU MIMAT0009112 None 2R 4405087 4405156 - Neoptera Bilateria No 1
Gpa-Mir-9-P11 None MIR-9 CUUUGGU None None Scaffold60 384436 384498 - Neoptera Bilateria Unknown 1
Hme-Mir-9-P11 hme-mir-9a MIR-9 CUUUGGU None MIMAT0025003 HE669612 10319 10377 - Neoptera Bilateria No 1
Bge-Mir-9-P12 V None MIR-9 CUUUGGU None None KZ614731.1 668640 668700 - Neoptera Bilateria 2 No 1
Dlo-Mir-9-P12 V None MIR-9 CUUUGGU None None NC_087228.1 37907 37968 - Neoptera Bilateria 2 No
Aae-Mir-9-P13 aae-mir-9b MIR-9 CUUUGGU MIMAT0014324 None supercont1.785 213584 213648 + Neoptera Bilateria No
Aga-Mir-9-P13 aga-mir-9b MIR-9 CUUUGGU MIMAT0001529 None NC_064602.1 5874685 5874750 - Neoptera Bilateria No 1
Bge-Mir-9-P13 None MIR-9 CUUUGGU None None KZ614731.1 666805 666865 - Neoptera Bilateria No 1 1
Dan-Mir-9-P13 dan-mir-9b MIR-9 CUUUGGU MIMAT0008416 None scaffold_12916 15864555 15864614 - Neoptera Bilateria No 1 1
Dlo-Mir-9-P13 None MIR-9 CUUUGGU None None NC_087228.1 37474 37532 - Neoptera Bilateria No
Dme-Mir-9-P13 dme-mir-9b MIR-9 CUUUGGU MIMAT0000395 MIMAT0020829 2L 16698758 16698820 + Neoptera Bilateria No 1 1
Dmo-Mir-9-P13 dmo-mir-9b MIR-9 CUUUGGU MIMAT0008666 None scaffold_6500 7202321 7202381 + Neoptera Bilateria No 1 1
Dsi-Mir-9-P13 None MIR-9 CUUUGGU None None 2L 16226513 16226573 + Neoptera Bilateria No 1 1
Dya-Mir-9-P13 dya-mir-9b MIR-9 CUUUGGU MIMAT0009113 None 2R 4404254 4404316 - Neoptera Bilateria No 1 1
Gpa-Mir-9-P13 None MIR-9 CUUUGGU None None Scaffold60 382083 382145 - Neoptera Bilateria No 1
Cbr-Mir-9-P16 cbr-mir-244 MIR-9 CUUUGGU MIMAT0000502 None I 3161588 3161646 + Caenorhabditis Bilateria No
Cel-Mir-9-P16 cel-mir-244 MIR-9 CUUUGGU MIMAT0000300 MIMAT0015118 chrI 4684336 4684399 - Caenorhabditis Bilateria No
Mgi-Mir-9-P17 None MIR-9 CUUUGGU None None scaffold42448 85409 85470 - C. gigas Bilateria No 1
Mgi-Mir-9-P18 None MIR-9 CUUUGGU None None scaffold42448 84463 84524 - C. gigas Bilateria No 1
Mgi-Mir-9-P19 None MIR-9 CUUUGGU None None scaffold42448 83582 83643 - C. gigas Bilateria No 1
Efe-Mir-9-P20 None MIR-9 CUUUGGU None None Efet.01.650086 1540 1600 + E. fetida Bilateria No 1
Efe-Mir-9-P21 None MIR-9 CUUUGGU None None Efet.01.1380669 63 123 - E. fetida Bilateria Unknown 1
Lpo-Mir-9-P22 None MIR-9 CUUUGGU None None NW_013665617.1 816199 816258 - L. polyphemus Bilateria No 1 1
Lpo-Mir-9-P23 None MIR-9 CUUUGGU None None NW_013666505.1 364125 364184 + L. polyphemus Bilateria No 1 1
Lpo-Mir-9-P24 None MIR-9 CUUUGGU None None NW_013665783.1 904900 904959 - L. polyphemus Bilateria No
Lpo-Mir-9-P25 None MIR-9 CUUUGGU None None NW_013665845.1 188152 188211 + L. polyphemus Bilateria No 1
Csc-Mir-9-P26 None MIR-9 CUUUGGU None None NW_019385500.1 106196 106255 + C. sculpturatus Bilateria No 1 1
Csc-Mir-9-P27 None MIR-9 CUUUGGU None None NW_019385150.1 14178 14237 + C. sculpturatus Bilateria No 1 1 1
Sme-Mir-9-P28 sme-mir-9a MIR-9 CUUUGGU MIMAT0011248 MIMAT0012146 NNSW01000020_dd_Smes_g4_20 3968660 3968723 - S. mediterranea Bilateria No 1
Sme-Mir-9-P29 sme-mir-9b MIR-9 CUUUGGU MIMAT0011247 MIMAT0012145 NNSW01000025_dd_Smes_g4_25 1299427 1299482 + S. mediterranea Bilateria No 1
Pca-Mir-9-P31 None MIR-9 CUUUGGU None None KQ715418.1 82183 82242 + P. caudatus Bilateria No
Pca-Mir-9-P32 None MIR-9 CUUUGGU None None KQ715199.1 119342 119403 - P. caudatus Bilateria Unknown 1
Ava-Mir-9-P33 None MIR-9 CUUUGGU None None CP075493.1 1601314 1601376 - A. vaga Bilateria No
Ava-Mir-9-P34 None MIR-9 CUUUGGU None None CP075496.1 13241633 13241695 + A. vaga Bilateria No
Pcr-Mir-9-P37 None MIR-9 CUUUGGU None None CAJQUW010016298.1 50141 50205 + P. crozeri Bilateria No 1
Pcr-Mir-9-P38 None MIR-9 CUUUGGU None None CAJQUW010001534.1 327276 327338 + P. crozeri Bilateria No 1
Tur-Mir-9-P39a tur-mir-9-1 MIR-9 CUUUGGU MIMAT0023082 MIMAT0023083 HE587301.1 1879586 1879648 + Bilateria Bilateria No 1 1
Tur-Mir-9-P39b tur-mir-9-2 MIR-9 CUUUGGU MIMAT0023082 MIMAT0023083 HE587301.1 1878278 1878340 - Bilateria Bilateria No 1 1

(red - mature/co-mature, blue - star)

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