MirGeneDB 3.0

4 Alligator mississippiensis microRNA genes with seed CUUUGGU (all species)
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To
Ami-Mir-9-P1 ami-mir-9-3 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017713709.1 12355229 12355290 + Gnathostomata Bilateria No 1 1
Ami-Mir-9-P2 ami-mir-9-2 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017707593.1 13620894 13620953 - Gnathostomata Bilateria No 1 1
Ami-Mir-9-P3 ami-mir-9-1 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038028 NW_017709017.1 781222 781283 + Gnathostomata Bilateria No 1 1
Ami-Mir-9-P4 ami-mir-9-4 MIR-9 CUUUGGU MIMAT0038027 MIMAT0038029 NW_017713014.1 4857 4916 + Gnathostomata Bilateria No 1 1 1

(red - mature/co-mature, blue - star)

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