MirGeneDB 3.0

4 Xenopus tropicalis microRNA genes with seed CUUUGGU (all species)
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC An Br Em Em He Ve
Xtr-Mir-9-P1 xtr-mir-9-3 MIR-9 CUUUGGU MIMAT0003649 MIMAT0003650 chr3 99283857 99283918 + Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P2 xtr-mir-9a-2 MIR-9 CUUUGGU MIMAT0003553 MIMAT0003554 chr1 170225668 170225727 - Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P3 xtr-mir-9a-1 MIR-9 CUUUGGU MIMAT0003553 MIMAT0003554 chr8 111349809 111349870 + Gnathostomata Bilateria No 1 1
Xtr-Mir-9-P4 xtr-mir-9b MIR-9 CUUUGGU MIMAT0003555 MIMAT0003556 chr1 102034638 102034697 + Gnathostomata Bilateria No 1 1

(red - mature/co-mature, blue - star)

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