| MirGeneDB ID | Bge-Mir-965 |
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| Family name |
MIR-965 (all species) |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-965
Aga-Mir-965
Dan-Mir-965
Dlo-Mir-965
Dma-Mir-965
Dme-Mir-965
Dmo-Mir-965
Dpu-Mir-965
Dsi-Mir-965
Dya-Mir-965
Gpa-Mir-965
Hme-Mir-965
Tca-Mir-965
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| Node of Origin (locus) |
Pancrustacea
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| Node of Origin (family) |
Pancrustacea
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Genome context
(Bger_2.0) |
KZ614839.1: 771062-771120 [-]
Ensembl
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| Seed |
GGGAGAA |
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Precursor
(pre-Mir +30nt flank) |
GAUUCACUUCAAGUUAUGGUUUGGCUUGAACGGGAGAAGCUGUAACGAUUAUGUUUUAUUACCAUCAUAAGCGUAUAGCUUUUCCCCUUCAAACUAUAUCCAAGAUCGCCAUGGAAGAA
Get precursor sequence
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| Structure | 10 20 30 40 50
GAUUCACUUCAAGUUAU- UU-| C C A A UUUUA
GG UGG UUGAA GGGAGAAGCUGUA CG UUAUG U
CC AUC AACUU CCCUUUUCGAUAU GC AAUAC U
AAGAAGGUACCGCUAGAA UAU^ A C - G UACCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Mature sequence |
Bge-Mir-965_5p |
| mirBase accession | None |
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| Sequence |
0- CGGGAGAAGCUGUAACGAUUAUG -23
Get sequence
|
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| Star sequence |
Bge-Mir-965_3p* |
| mirBase accession | None |
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| Sequence |
37- UAAGCGUAUAGCUUUUCCCCUU -59
Get sequence
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