| MirGeneDB ID | Aae-Mir-965 |
|---|
| Family name |
MIR-965 (all species) |
|---|
| Seed |
GGGGAAA |
|---|
| Species |
Yellow fever mosquito (Aedes aegypti) |
|---|
| MiRBase ID |
aae-mir-965
|
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| Paralogues |
|
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| Orthologues |
Bge-Mir-965
Dan-Mir-965
Dma-Mir-965
Dme-Mir-965
Dmo-Mir-965
Dpu-Mir-965
Dsi-Mir-965
Dya-Mir-965
Hme-Mir-965
Tca-Mir-965
|
|---|
| Node of Origin (locus) |
Pancrustacea
|
|---|
| Node of Origin (family) |
Pancrustacea
|
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Genome context
(Aaeg_L3) |
supercont1.51: 2008659-2008722 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCGACCUCGUUCCGUCUGAUGGAUUCUGAAGGGGGAAAUCCUGUACGCUGUAUGUUGUAUUUGAAUAAUCCAUAAGCGUAUAGCUUUUCCCAUUCGGCGUUCAUUGUUACAUCAGCAGCAGCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCGACCUCGUUCCGUCU--| U GG UC G UUGUAUU
GAUGGAU CUGAA GGGAAA CUGUACGCU UAUG U
UUACUUG GGCUU CCCUUU GAUAUGCGA AUAC G
AACGACGACGACUACAUUG^ C A- UC - CUAAUAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Aae-Mir-965_5p |
| mirBase accession | None |
|---|
| Sequence |
0- GGGGGAAAUCCUGUACGCUGUAUG -24
Get sequence
|
|---|
| Star sequence |
Aae-Mir-965_3p* |
| mirBase accession | MIMAT0014268 |
|---|
| Sequence |
42- UAAGCGUAUAGCUUUUCCCAUU -64
Get sequence
|
|---|
