| MirGeneDB ID | Hme-Mir-965 |
|---|
| Family name |
MIR-965 (all species) |
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| Seed |
GGGAGAA |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
hme-mir-965
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-965
Bge-Mir-965
Dan-Mir-965
Dma-Mir-965
Dme-Mir-965
Dmo-Mir-965
Dpu-Mir-965
Dsi-Mir-965
Dya-Mir-965
Tca-Mir-965
|
|---|
| Node of Origin (locus) |
Pancrustacea
|
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| Node of Origin (family) |
Pancrustacea
|
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Genome context
(Hmel_1) |
HE670498: 371732-371791 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AAGAUGUCCAUUUUAUGCUGUAUAACUGAACGGGAGAAGUUAUAGCGCUGUAUGUUAUGUUAUAGCCAUAAGCGUAUAGCUUUUCCCCUUGGUUGUACAACAAAAUGCAUCACGAAGAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAGAUGUCCAUUUUAUGC---| UG AC G G UUAUG
UGUAUAAC A GGGAGAAGUUAUA CGCU UAUG U
ACAUGUUG U CCCUUUUCGAUAU GCGA AUAC U
UGAGAAGCACUACGUAAAACA^ GU C- - - CGAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Hme-Mir-965_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CGGGAGAAGUUAUAGCGCUGUAUG -24
Get sequence
|
|---|
| Co-mature sequence |
Hme-Mir-965_3p |
| mirBase accession | MIMAT0024996 |
|---|
| Sequence |
38- UAAGCGUAUAGCUUUUCCCCUU -60
Get sequence
|
|---|
