MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-965

Family name MIR-965 (all species)
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-965
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_melanogaster_BDGP6)		 2L: 243055-243118 [-] UCSC Ensembl
Seed AAGCGUA
Precursor
(pre-Mir +30nt flank)		 
CAAUCUGGACAAUAUUGCUCAACAUUUUGGGGGGUAAAACUGUACGUUAUAUGUGCCCUUCUGUGAUAUUCAUAAGCGUAUAGCUUUUCCCCUUAAAAGUUAGAGCUAUUGCAACGAAAAGUGU
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Structure
        10          20         30         40        50        60  
CAAUCUGGACAAUAUUG--   -|  A          U    -         A    UGCCCUUC 
                   CUC AAC UUUUGGGGGG AAAA CUGUACGUU UAUG        \
                   GAG UUG AAAAUUCCCC UUUU GAUAUGCGA AUAC        U
UGUGAAAAGCAACGUUAUC   A^  -          -    C         -    UUAUAGUG 
  120       110       100         90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-965_5p*
mirBase accessionMIMAT0020861
Sequence 
0- GGGGUAAAACUGUACGUUAUAUG -23
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Mature sequence

Dme-Mir-965_3p
mirBase accessionMIMAT0005480
Sequence 
42- UAAGCGUAUAGCUUUUCCCCUU -64
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Proposed targets microrna.org: MIMAT0005480
TargetScanFly: dme-miR-965