MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-965

Family name MIR-965 (all species)
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dme-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Dana_caf1)		 scaffold_12943: 4147981-4148044 [+] Ensembl
Seed AAGCGUA
Precursor
(pre-Mir +30nt flank)		 
AUGGGUUUUCUGGAAGCUCAACCCUUUUGGGGGGUCAAACUGUACGUUCUAUGUGGCAAUCUUAGAAAUUCAUAAGCGUAUAGCUUUUCCCCUUAAAAGUUGAAGCAAAGUCAACAAAUCUCAA
Get precursor sequence
Structure
        10            20        30        40        50        60  
AUGGGUUUUCUGGAAGC----|    CC          UC  A         C    UGGCAAUC 
                     UCAAC  UUUUGGGGGG  AA CUGUACGUU UAUG        \
                     AGUUG  AAAAUUCCCC  UU GAUAUGCGA AUAC        U
AACUCUAAACAACUGAAACGA^    --          UU  C         -    UUAAAGAU 
  120       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe
Star sequence

Dan-Mir-965_5p*
mirBase accessionNone
Sequence 
0- GGGGUCAAACUGUACGUUCUAUG -23
Get sequence
Mature sequence

Dan-Mir-965_3p
mirBase accessionNone
Sequence 
42- UAAGCGUAUAGCUUUUCCCCUU -64
Get sequence