| MirGeneDB ID | Bge-Novel-12 |
|---|
| Family name |
BGE-NOVEL-12 (all species) |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. germanica
|
|---|
| Node of Origin (family) |
B. germanica
|
|---|
Genome context
(Bger_2.0) |
KZ614523.1: 1698465-1698524 [+]
Ensembl
|
|---|
| Seed |
UACGAAC |
|---|
Precursor
(pre-Mir +30nt flank) |
ACACAGAGGAGUUUAGGUCUUCCCACGUAUCGAUGUCAUUUUGGUUCGUAAUGUUGUAAUUGUCUCACUACGAACCAGAAUGACAUCGCGUUGUUCGAAGACAUUUGAUGCUGGAACCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACACAGAGGAGUUUAGG--| CC UAU A UUGUA
UCUUC ACG CGAUGUCAUUUUGGUUCGUA UG A
AGAAG UGU GCUACAGUAAGACCAAGCAU AC U
CACCAAGGUCGUAGUUUAC^ CU UGC C UCUGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Bge-Novel-12_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGAUGUCAUUUUGGUUCGUAAUG -23
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-12_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CUACGAACCAGAAUGACAUCGCG -60
Get sequence
|
|---|
