| MirGeneDB ID | Bge-Novel-12 |
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| Family name |
BGE-NOVEL-12 (all species) |
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| Seed |
UACGAAC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614523.1: 1698465-1698524 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACACAGAGGAGUUUAGGUCUUCCCACGUAUCGAUGUCAUUUUGGUUCGUAAUGUUGUAAUUGUCUCACUACGAACCAGAAUGACAUCGCGUUGUUCGAAGACAUUUGAUGCUGGAACCAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACACAGAGGAGUUUAGG--| CC UAU A UUGUA
UCUUC ACG CGAUGUCAUUUUGGUUCGUA UG A
AGAAG UGU GCUACAGUAAGACCAAGCAU AC U
CACCAAGGUCGUAGUUUAC^ CU UGC C UCUGU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Novel-12_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGAUGUCAUUUUGGUUCGUAAUG -23
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-12_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CUACGAACCAGAAUGACAUCGCG -60
Get sequence
|
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