| MirGeneDB ID | Bge-Novel-5 |
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| Family name |
BGE-NOVEL-5 (all species) |
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| Seed |
GGACUUC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614421.1: 901262-901321 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGCCCUCGUCAAGGGUUUUAAAAAGACCAUGGACUUCAUCCUCAGGGAUUCGUUGUUCUGCUGUAGAACUCUAGAAGAUGAAGGCCAUGGCCCAUUGAUAGCGCUCGAGGAACGAAUUU
Get precursor sequence
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| Structure | 10 20 30 40 50
CAGCCCUCGUCAAGGGUUUUAAAAAGA-- A C -| A GUUGUU
CCAUGG CUUCAUC UC AGGG UUC C
GGUACC GAAGUAG AG UCUC AAG U
UUUAAGCAAGGAGCUCGCGAUAGUUACCC G A A^ - AUGUCG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-5_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGGACUUCAUCCUCAGGGAUUC -22
Get sequence
|
|---|
| Star sequence |
Bge-Novel-5_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- ACUCUAGAAGAUGAAGGCCAUG -60
Get sequence
|
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