Mir-375

MirGeneDB ID

Bge-Mir-375

Family name

MIR-375 (all species)

Species

Cockroach (Blattella germanica)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-375 Aca-Mir-375 Aga-Mir-375 Agr-Mir-375 Ami-Mir-375 Asu-Mir-375 Ava-Mir-375-P20 Ava-Mir-375-P21 Bfl-Mir-375 Bko-Mir-375 Bla-Mir-375 Bpl-Mir-375 Bta-Mir-375 Cbr-Mir-375 Cel-Mir-375 Cfa-Mir-375 Cin-Mir-375 Cja-Mir-375 Cli-Mir-375 Cpi-Mir-375 Cpo-Mir-375 Csc-Mir-375-P11 Csc-Mir-375-P12 Cte-Mir-375-P15 Cte-Mir-375-P16 Dan-Mir-375 Dgr-Mir-375 Dlo-Mir-375 Dma-Mir-375 Dme-Mir-375 Dmo-Mir-375 Dno-Mir-375 Dpu-Mir-375 Dre-Mir-375-P1 Dre-Mir-375-P2 Dsi-Mir-375 Dya-Mir-375 Eba-Mir-375 Ebu-Mir-375 Eca-Mir-375 Efe-Mir-375 Esc-Mir-375 Ete-Mir-375 Gga-Mir-375 Gja-Mir-375 Gmo-Mir-375-P2 Gpa-Mir-375 Hme-Mir-375 Hru-Mir-375 Hsa-Mir-375 Isc-Mir-375 Laf-Mir-375 Lan-Mir-375 Lch-Mir-375 Lgi-Mir-375 Lhy-Mir-375 Llo-Mir-375 Loc-Mir-375 Lpo-Mir-375-P8 Lpo-Mir-375-P9 Lpo-Mir-375-P10 Mal-Mir-375-P2 Mdo-Mir-375 Mgi-Mir-375-P3 Mgi-Mir-375-P4 Mml-Mir-375 Mmr-Mir-375 Mmu-Mir-375 Mom-Mir-375 Mun-Mir-375-P7a Mun-Mir-375-P7b Neu-Mir-375 Npo-Mir-375 Oan-Mir-375 Obi-Mir-375 Ocu-Mir-375 Ofu-Mir-375 Ovu-Mir-375 Pab-Mir-375 Pau-Mir-375 Pbv-Mir-375 Pca-Mir-375 Pcr-Mir-375 Pdu-Mir-375 Pfl-Mir-375 Pma-Mir-375-P5 Pma-Mir-375-P6 Pmi-Mir-375 Pve-Mir-375 Rno-Mir-375 Rph-Mir-375-P17a Rph-Mir-375-P17b Rph-Mir-375-P17c Rph-Mir-375-P17d Rph-Mir-375-P18 Rph-Mir-375-P19a Rph-Mir-375-P19b Sha-Mir-375 Sko-Mir-375 Sne-Mir-375 Snu-Mir-375 Spt-Mir-375 Spu-Mir-375 Sto-Mir-375 Tca-Mir-375 Tgu-Mir-375 Tni-Mir-375-P2 Tur-Mir-375 War-Mir-375 Xla-Mir-375-P13 Xla-Mir-375-P14 Xtr-Mir-375

Node of Origin (locus)

Nephrozoa

Node of Origin (family)

Nephrozoa

Genome context
(Bger_2.0)

KZ616959.1: 103928-103987 [-] Ensembl

Seed

UUGUUCG

Precursor
(pre-Mir +30nt flank)

CUUUUUUUCUUCUUCUUUUGCGUCCUUCUGACUUGCGCUUUGCGGACAAACUGUUGCAUUCCAAGGCGUUUGUUCGUUCGGCUCGAGUUAAAAAGGGCUGCAUCAAACAUCGGCAAUCAU

Get precursor sequence

Structure

        10        20          30        40        50         
CUUUUUUUCUUCUUCUUU   -      C-|      C   UU          UGUUGCA 
                  UGC GUCCUU  UGACUUG GCU  GCGGACAAAC       U
                  ACG CGGGAA  AUUGAGC CGG  UGCUUGUUUG       U
UACUAACGGCUACAAACU   U      AA^      U   CU          CGGAACC 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Ad	Co	Co	Di	Di	Eg	Eg	Em	Em	Em	Em	Em	Em	Em	Em	Em	Em	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ov

Star sequence

Bge-Mir-375_5p*

mirBase accession

None

Sequence

0- ACUUGCGCUUUGCGGACAAACU -22

Get sequence

Mature sequence

Bge-Mir-375_3p

mirBase accession

None

Sequence

38- UUUGUUCGUUCGGCUCGAGUUA -60

Get sequence