MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-375-P7b

Family name MIR-375 (all species)
Seed UUGUUCG
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-375-P7a 
Orthologues Aae-Mir-375  Aca-Mir-375  Ami-Mir-375  Asu-Mir-375  Bfl-Mir-375  Bge-Mir-375  Bla-Mir-375  Bpl-Mir-375  Bta-Mir-375  Cbr-Mir-375  Cel-Mir-375  Cfa-Mir-375  Cin-Mir-375  Cli-Mir-375  Cpi-Mir-375  Cpo-Mir-375  Cte-Mir-375  Dan-Mir-375  Dma-Mir-375  Dme-Mir-375  Dmo-Mir-375  Dno-Mir-375  Dpu-Mir-375  Dsi-Mir-375  Dya-Mir-375  Ebu-Mir-375  Efe-Mir-375  Esc-Mir-375  Ete-Mir-375  Gga-Mir-375  Gja-Mir-375  Hme-Mir-375  Hsa-Mir-375  Isc-Mir-375  Lan-Mir-375  Lch-Mir-375  Lgi-Mir-375  Loc-Mir-375  Mdo-Mir-375  Mml-Mir-375  Mmu-Mir-375  Npo-Mir-375  Oan-Mir-375  Obi-Mir-375  Ocu-Mir-375  Ovu-Mir-375  Pbv-Mir-375  Pfl-Mir-375  Pmi-Mir-375  Rno-Mir-375  Sha-Mir-375  Sko-Mir-375  Spt-Mir-375  Spu-Mir-375  Sto-Mir-375  Tca-Mir-375  Tgu-Mir-375  Xtr-Mir-375 
Node of Origin (locus) M. unicolor
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)
375_CABFKK010000927.1:144705-144847: 43-101 [-]
Precursor
(pre-Mir +30nt flank)
CCAGACCCGGACCAACUCUGCGCUUGCCUCACGCCGAGCCAGACGCGCAAUGCCUUAAAGUCAGCGUUUUGUUCGUUCGGCUCGCGUUAAGCAGGCUCAGCAUGGCAGCCAGCGCCGGC
Get precursor sequence
Structure
        10          20        30        40        50         
CCAGACCCGGACCAACU--|  C      CUC    C     AG   C    U  CUUAA 
                   CUG GCUUGC   ACGC GAGCC  ACG GCAA GC     A
                   GAC CGGACG   UGCG CUCGG  UGC UGUU UG     G
CGGCCGCGACCGACGGUAC^  U      AAU    -     CU   U    U  CGACU 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Mun-Mir-375-P7b_5p* (predicted)

mirBase accessionNone
Sequence
0- ACGCCGAGCCAGACGCGCAAUGC -23
Get sequence
Mature sequence

Mun-Mir-375-P7b_3p

mirBase accessionNone
Sequence
37- UUUGUUCGUUCGGCUCGCGUUA -59
Get sequence