Mir-375

MirGeneDB ID

Asu-Mir-375

Family name

MIR-375 (all species)

Seed

UUGUUCG

Species

Large roundworm (Ascaris suum)

MiRBase ID

asu-mir-375

Paralogues

Orthologues

Aae-Mir-375 Aca-Mir-375 Ami-Mir-375 Bfl-Mir-375 Bge-Mir-375 Bla-Mir-375 Bpl-Mir-375 Bta-Mir-375 Cbr-Mir-375 Cel-Mir-375 Cfa-Mir-375 Cgi-Mir-375-P3 Cgi-Mir-375-P4 Cin-Mir-375 Cli-Mir-375 Cpi-Mir-375 Cpo-Mir-375 Csc-Mir-375-P11 Csc-Mir-375-P12 Cte-Mir-375 Dan-Mir-375 Dma-Mir-375 Dme-Mir-375 Dmo-Mir-375 Dno-Mir-375 Dpu-Mir-375 Dre-Mir-375-P1 Dre-Mir-375-P2 Dsi-Mir-375 Dya-Mir-375 Ebu-Mir-375 Efe-Mir-375 Esc-Mir-375 Ete-Mir-375 Gga-Mir-375 Gja-Mir-375 Gmo-Mir-375-P2 Hme-Mir-375 Hsa-Mir-375 Isc-Mir-375 Lan-Mir-375 Lch-Mir-375 Lgi-Mir-375 Loc-Mir-375 Lpo-Mir-375-P8 Lpo-Mir-375-P9 Lpo-Mir-375-P10 Mal-Mir-375-P2 Mdo-Mir-375 Mml-Mir-375 Mmu-Mir-375 Mun-Mir-375-P7a Mun-Mir-375-P7b Npo-Mir-375 Oan-Mir-375 Obi-Mir-375 Ocu-Mir-375 Ovu-Mir-375 Pbv-Mir-375 Pfl-Mir-375 Pma-Mir-375-P5 Pma-Mir-375-P6 Pmi-Mir-375 Rno-Mir-375 Sha-Mir-375 Sko-Mir-375 Spt-Mir-375 Spu-Mir-375 Sto-Mir-375 Tca-Mir-375 Tgu-Mir-375 Tni-Mir-375-P2 Xla-Mir-375-P13 Xla-Mir-375-P14 Xtr-Mir-375

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(ASU_PRJNA80881_plustraces)

Scaffold53: 8412-8477 [-]

Precursor
(pre-Mir +30nt flank)

UCGAGACGCAAACUGUAUCGGUUUUCACUCUUCGCAAGCGAACUGAUCAAAACCCACACUCGGUGACGGACGUUUUGUUCGUUUUGCUUGCGAUCAGUGCGAGCGUACGAUAAAUCAUACAUCCAU

Get precursor sequence

Structure

        10        20          30        40        50        60  
UCGAGACGCAAACUGUAUCG--|   U    CU           C   U      CCACACUC 
                      GUUU CACU  UCGCAAGCGAA UGA CAAAAC        G
                      CGAG GUGA  AGCGUUCGUUU GCU GUUUUG        G
UACCUACAUACUAAAUAGCAUG^   C    CU           U   U      CAGGCAGU 
    120       110       100        90        80        70