MirGeneDB 2.1
MirGeneDB ID

Gmo-Mir-375-P2

Family name MIR-375 (all species)
Seed UUGUUCG
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-375
Paralogues
Orthologues Aae-Mir-375  Aca-Mir-375  Ami-Mir-375  Asu-Mir-375  Bfl-Mir-375  Bge-Mir-375  Bla-Mir-375  Bpl-Mir-375  Bta-Mir-375  Cbr-Mir-375  Cel-Mir-375  Cfa-Mir-375  Cin-Mir-375  Cli-Mir-375  Cpi-Mir-375  Cpo-Mir-375  Cte-Mir-375  Dan-Mir-375  Dma-Mir-375  Dme-Mir-375  Dmo-Mir-375  Dno-Mir-375  Dpu-Mir-375  Dre-Mir-375-P2  Dsi-Mir-375  Dya-Mir-375  Ebu-Mir-375  Efe-Mir-375  Esc-Mir-375  Ete-Mir-375  Gga-Mir-375  Gja-Mir-375  Hme-Mir-375  Hsa-Mir-375  Isc-Mir-375  Lan-Mir-375  Lch-Mir-375  Lgi-Mir-375  Loc-Mir-375  Mal-Mir-375-P2  Mdo-Mir-375  Mml-Mir-375  Mmu-Mir-375  Npo-Mir-375  Oan-Mir-375  Obi-Mir-375  Ocu-Mir-375  Ovu-Mir-375  Pbv-Mir-375  Pfl-Mir-375  Pmi-Mir-375  Rno-Mir-375  Sha-Mir-375  Sko-Mir-375  Spt-Mir-375  Spu-Mir-375  Sto-Mir-375  Tca-Mir-375  Tgu-Mir-375  Tni-Mir-375-P2  Xtr-Mir-375 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig384549: 352-409 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCUGACUGUUGAUGGUCUGUAUUUGCCUCACGUUGAGCCCCACGCACAAUACCUGAAGGUGAAGUUUUGUUCGUUCGGCUCGCGUUAAGCAGGUACAGGUGUGCAACUUGAAACAAC
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Structure
        10          20        30        40        50         
GUCUGACUGUUGAUGGU--|         CUC    U     CC   C    U  CUGAA 
                   CUGUAUUUGC   ACGU GAGCC  ACG ACAA AC     \
                   GACAUGGACG   UGCG CUCGG  UGC UGUU UG     G
CAACAAAGUUCAACGUGUG^         AAU    -     CU   U    U  AAGUG 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-375-P2_5p*
mirBase accessionMIMAT0044043
Sequence 
0- ACGUUGAGCCCCACGCACAAUAC -23
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Mature sequence

Gmo-Mir-375-P2_3p
mirBase accessionMIMAT0044044
Sequence 
36- UUUGUUCGUUCGGCUCGCGUUA -58
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