MirGeneDB

MirGeneDB ID

Dmo-Bantam

Family name BANTAM (all species)
Seed GAGAUCA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-bantam
Paralogues
Orthologues Aae-Bantam  Asu-Bantam-o1  Asu-Bantam-o2  Asu-Bantam-o3  Asu-Bantam-o4  Bge-Bantam  Cbr-Bantam-P1a  Cbr-Bantam-P1b  Cbr-Bantam-P2  Cbr-Bantam-P3  Cbr-Bantam-P4  Cel-Bantam-P1  Cel-Bantam-P2  Cel-Bantam-P3  Cel-Bantam-P4  Cel-Bantam-P5a  Cel-Bantam-P5b  Cel-Bantam-P5c  Cgi-Bantam  Cte-Bantam  Dan-Bantam  Dme-Bantam  Dpu-Bantam  Efe-Bantam-P6  Efe-Bantam-P7  Efe-Bantam-P8  Hme-Bantam  Isc-Bantam-P9a  Isc-Bantam-P9b  Lan-Bantam  Lgi-Bantam  Tca-Bantam 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Dmoj_caf1)
scaffold_6680: 4143325-4143385 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUUAUCUCACUAUGAUUUGACUACGAAACCGGUUUUCGAUUUGGUUUGACUGUUUUUUUAUACAAGUGAGAUCAUUUUGAAAGCUGAUUUUGUCAAUGAAUAACCACAUUCCACAUCCC
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Structure
        10             20        30        40        50          
CGUUUAUCUCACUAUGAU-----|    UAC    C          UU      G   GUUUUU 
                       UUGAC   GAAA CGGUUUUCGA  UGGUUU ACU      \
                       AACUG   UUUU GUCGAAAGUU  ACUAGA UGA      U
CCCUACACCUUACACCAAUAAGU^    ---    A          UU      G   ACAUAU 
 .       110       100           90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Bantam_5p*

MirBase accessionNone
Sequence
0- CCGGUUUUCGAUUUGGUUUGACU -23
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Mature sequence

Dmo-Bantam_3p

MirBase accessionMIMAT0008634
Sequence
38- UGAGAUCAUUUUGAAAGCUGAUU -61
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