MirGeneDB 2.1

MirGeneDB ID

Csc-Bantam-P16

Family name BANTAM (all species)
Seed GAGAUCA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Bantam-P17 
Orthologues Aae-Bantam  Bge-Bantam  Bpl-Bantam  Cgi-Bantam  Cte-Bantam  Dan-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Esc-Bantam  Hme-Bantam  Lan-Bantam  Lgi-Bantam  Npo-Bantam  Ovu-Bantam  Tca-Bantam 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)
NW_019385956.1: 96869-96929 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUAUUUAUAUGAAGAUUCUUAGACAAAACUGGUUUUCACAAUGAUUUUCCAGAUGGUUAUGAUAUCUGAGAUCAUUGUGAAAGCUGAUUUUGUUGUCGUUUCGUCGUUUUCACGAAGAU
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Structure
        10        20          30        40        50        60 
AUAUAUUUAUAUGAAGAUUCUUA--|      CU                 UC    UGGUU 
                         GACAAAA  GGUUUUCACAAUGAUUU  CAGA     \
                         UUGUUUU  UCGAAAGUGUUACUAGA  GUCU     A
UAGAAGCACUUUUGCUGCUUUGCUG^      AG                 --    AUAGU 
 .       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Bantam-P16_5p*

mirBase accessionNone
Sequence
0- CUGGUUUUCACAAUGAUUUUCCAGA -25
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Mature sequence

Csc-Bantam-P16_3p

mirBase accessionNone
Sequence
38- UGAGAUCAUUGUGAAAGCUGAUU -61
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