MirGeneDB 3.0
MirGeneDB ID

Ava-Bantam-P24

Family name BANTAM (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Bantam-P23 
Orthologues Aae-Bantam  Aga-Bantam  Agr-Bantam  Bge-Bantam  Bko-Bantam  Bpl-Bantam  Cte-Bantam  Dan-Bantam  Dgr-Bantam  Dlo-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Eba-Bantam  Esc-Bantam  Gpa-Bantam  Gsa-Bantam  Gsp-Bantam  Hme-Bantam  Hru-Bantam  Lan-Bantam  Lgi-Bantam  Lhy-Bantam  Llo-Bantam  Mgi-Bantam  Mom-Bantam  Nag-Bantam  Npo-Bantam  Ofu-Bantam  Ovu-Bantam  Pau-Bantam  Pcr-Bantam  Ple-Bantam  Pve-Bantam  Sma-Bantam  Sne-Bantam  Snu-Bantam  Tca-Bantam  Tur-Bantam  War-Bantam 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075494.1: 5822042-5822105 [+] Ensembl
Clustered miRNAs
(< 50kb from Bantam-P24)		 Bantam-P24 CP075494.1: 5822042-5822105 [+] Ensembl
Let-7-P24 CP075494.1: 5828078-5828140 [+] Ensembl
Seed GAGAUCA
Precursor
(pre-Mir +30nt flank)		 
AUACGAAAAUUAUCGACAAGUUCGAACGGUUGGAUAAAAAUAUGAUCUACACAUGGAUUUCCAAUGAAUUUGUGAGAUCACAUUUUUAUUCUAUUGUUGACUUCUCUACAAAAUUACGAUAAUU
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Structure
        10            20        30        40        50        60  
AUACGAAAAUUAUCGAC----|    CG      U          A      A    UGGAUUUC 
                     AAGUU  AACGGU GGAUAAAAAU UGAUCU CACA        \
                     UUCAG  UUGUUA CUUAUUUUUA ACUAGA GUGU        C
UUAAUAGCAUUAAAACAUCUC^    --      U          C      -    UUAAGUAA 
  120       110       100          90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Ava-Bantam-P24_5p*
mirBase accessionNone
Sequence 
0- UGGAUAAAAAUAUGAUCUACACA -23
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Mature sequence

Ava-Bantam-P24_3p
mirBase accessionNone
Sequence 
42- UGAGAUCACAUUUUUAUUCUAU -64
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