MirGeneDB 3.0
MirGeneDB ID

Egr-Bantam-P27

Family name BANTAM (all species)
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-bantam
Paralogues
Orthologues Aae-Bantam  Aga-Bantam  Agr-Bantam  Bge-Bantam  Bko-Bantam  Bpl-Bantam  Cte-Bantam  Dan-Bantam  Dgr-Bantam  Dlo-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Eba-Bantam  Esc-Bantam  Gpa-Bantam  Gsa-Bantam  Gsp-Bantam  Hme-Bantam  Hru-Bantam  Lan-Bantam  Lgi-Bantam  Lhy-Bantam  Llo-Bantam  Mgi-Bantam  Mom-Bantam  Nag-Bantam  Npo-Bantam  Ofu-Bantam  Ovu-Bantam  Pau-Bantam  Pcr-Bantam  Ple-Bantam  Pve-Bantam  Sma-Bantam  Sne-Bantam  Snu-Bantam  Tca-Bantam  Tur-Bantam  War-Bantam 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000171.1: 120988-121060 [-] UCSC Ensembl
Seed GAGAUCG
Precursor
(pre-Mir +30nt flank)		 
UGUGUUGUCACUUGACAGGACGAGUGAAGCGGCUUUUCUCGCGUUCUGAGAGCGUUAAUUCUUUAGUUAAACUACCGCCUUCUGAGAUCGCGAUUACAGCUGAUUCCUUGUCUACGAACUUCGUCUCUGUUUU
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Structure
        10           20        30        40        50        60      
UGUGUUGUCACUUGACA---|      U   G     UUUC     U   G   GCGUUAAUUCUUUA 
                    GGACGAG GAA CGGCU    UCGCG UCU AGA              \
                    UCUGUUC CUU GUCGA    AGCGC AGA UCU              G
UUUUGUCUCUGCUUCAAGCA^      -   A     CAUU     U   G   UCCGCCAUCAAAUU 
 130       120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Bantam-P27_5p* (predicted)
mirBase accessionMIMAT0041173
Sequence 
0- GGCUUUUCUCGCGUUCUGAGA -21
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Mature sequence

Egr-Bantam-P27_3p
mirBase accessionMIMAT0041174
Sequence 
52- UGAGAUCGCGAUUACAGCUGA -73
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