MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-1993

Family name MIR-1993 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1993  Ava-Mir-1993-P10  Ava-Mir-1993-P11  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Efe-Mir-1993-P1  Efe-Mir-1993-P2  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Lpo-Mir-1993-P3  Lpo-Mir-1993-P4  Lpo-Mir-1993-P5  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ofu-Mir-1993-P12  Ofu-Mir-1993-P13  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pcr-Mir-1993-P14  Pcr-Mir-1993-P15  Pdu-Mir-1993  Pve-Mir-1993-P8  Pve-Mir-1993-P9  Rph-Mir-1993  Sma-Mir-1993  Sme-Mir-1993-P6  Sme-Mir-1993-P7  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01000043: 481412-481471 [-] Ensembl
Seed AUUAUGC
Precursor
(pre-Mir +30nt flank)		 
UAGAUAGGAAGAUUUUCAGACUAGAUGGUAUCGGGAAUAGUAGUGUAAUGCUGUGAAGGUGAAACAGGUAUUAUGCUGCUAUUCACGAGACGGUGCUAGUCCCAGUGUCUACACCUUUAC
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Structure
        10         20         30        40        50         
UAGAUAGGAAGAUUUUCA-      -| G  A   G                  GUGAAG 
                   GACUAG AU GU UCG GAAUAGUAGUGUAAUGCU      G
                   CUGAUC UG CA AGC CUUAUCGUCGUAUUAUGG      U
CAUUUCCACAUCUGUGACC      G^ G  G   A                  ACAAAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
To To
Star sequence

Lan-Mir-1993_5p*
mirBase accessionNone
Sequence 
0- UCGGGAAUAGUAGUGUAAUGCU -22
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Mature sequence

Lan-Mir-1993_3p
mirBase accessionNone
Sequence 
38- UAUUAUGCUGCUAUUCACGAGA -60
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