MirGeneDB 3.0
MirGeneDB ID

Pcr-Mir-1993-P15

Family name MIR-1993 (all species)
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-1993-P14 
Orthologues Agr-Mir-1993  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pdu-Mir-1993  Rph-Mir-1993  Sma-Mir-1993  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) P. crozeri
Node of Origin (family) Protostomia
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)		 CAJQUW010007880.1: 108937-109001 [+] Ensembl
Seed AUUAUGC
Precursor
(pre-Mir +30nt flank)		 
CAUUGGGUGAAAGCAGCGGUUCCAUUGCGGCGUGAUUAACAGUCAUAAUUACGCAGUUACUCUAAUUGUUUUCGUAUUAUGCUAUUAUUCACGUCACAGGGAACUCUAAGCAGCUGAACAAAAGA
Get precursor sequence
Structure
        10           20        30        40        50        60   
CAUUGGGUGAAAGCAGC---|     A   C       U   C  U      U  GCAGUUACUC 
                    GGUUCC UUG GGCGUGA UAA AG CAUAAU AC          \
                    UCAAGG GAC CUGCACU AUU UC GUAUUA UG          U
AGAAAACAAGUCGACGAAUC^     -   A       U   A  -      -  CUUUUGUUAA 
   120       110       100         90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pcr-Mir-1993-P15_5p*
mirBase accessionNone
Sequence 
0- CGUGAUUAACAGUCAUAAUUAC -22
Get sequence
Mature sequence

Pcr-Mir-1993-P15_3p
mirBase accessionNone
Sequence 
44- UAUUAUGCUAUUAUUCACGUC -65
Get sequence