MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1993-P9

Family name MIR-1993 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1993-P8 
Orthologues Agr-Mir-1993  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pdu-Mir-1993  Rph-Mir-1993  Sma-Mir-1993  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Protostomia
Genome context
(Pve_genome_chr_only)		 Pve_Chr4: 263615614-263615671 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1993-P9)		 Mir-1993-P8 Pve_Chr4: 263612080-263612137 [+] Ensembl
Mir-1993-P9 Pve_Chr4: 263615614-263615671 [+] Ensembl
Seed AUUAUGC
Precursor
(pre-Mir +30nt flank)		 
UUGACAACGUCUGUCGGGAACUCCAUAAUUUCGGGAAUAUUAGUGUAAUGCCGUAUUAUGCUUUAGUAUUAUGCUGUUAUUCACGAAAUGAGGGGAAAUAACAUCAGGAUUUACUUGU
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Structure
        10        20           30        40        50        
UUGACAACGUCUGUCGGGAA---|   AUA      G     U           CGUAUU 
                       CUCC   AUUUCG GAAUA UAGUGUAAUGC      A
                       GGGG   UAAAGC CUUAU GUCGUAUUAUG      U
UGUUCAUUUAGGACUACAAUAAA^   AG-      A     U           AUUUCG 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Pve-Mir-1993-P9_5p*
mirBase accessionNone
Sequence 
0- UCGGGAAUAUUAGUGUAAUGCC -22
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Mature sequence

Pve-Mir-1993-P9_3p
mirBase accessionNone
Sequence 
36- UAUUAUGCUGUUAUUCACGAAA -58
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