MirGeneDB 2.1
MirGeneDB ID

Sme-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Freshwater planarian (Schmidtea mediterranea)
MiRBase ID sme-mir-750
Paralogues
Orthologues Aae-Mir-750  Asu-Mir-750  Bge-Mir-750  Bpl-Mir-750  Cgi-Mir-750  Csc-Mir-750-P8  Csc-Mir-750-P9  Cte-Mir-750  Dma-Mir-750  Dpu-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Lpo-Mir-750-P7  Npo-Mir-750  Obi-Mir-750  Ovu-Mir-750  Tca-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Sme_GCA_002600895.1_ASM260089v1_alt)		 NNSW01000064_dd_Smes_g4_64: 240588-240657 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-750)		 Mir-1175-P9 NNSW01000064_dd_Smes_g4_64: 240466-240524 [-] UCSC Ensembl
Mir-750 NNSW01000064_dd_Smes_g4_64: 240588-240657 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACAUAAAAUAAUUGAAAUCAGAUUUUCAGCACUGGAAGGUUUGGUUUAGCUGCUGUGCACCGUCAUGUCGACACAGUCAGAUCUAACUCUUCCAGUUCUAAAGCUGAUAGCGAACGUCGGUUUCCGGUU
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Structure
        10            20        30         40        50        60    
AACAUAAAAUAAUUGAA----|    A    C  C        -   U     AG  GCUGUGCACCG 
                     AUCAG UUUU AG ACUGGAAG GUU GGUUU  CU           \
                     UAGUC GAAA UC UGACCUUC CAA CUAGA  GA           U
UUGGCCUUUGGCUGCAAGCGA^    -    -  U        U   U     CU  CACAGCUGUAC 
.       120       110         100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Se Se Se Se Se Se Se Se Se Se Se Se Ne Wh Wh Wh
Star sequence

Sme-Mir-750_5p*
mirBase accessionMIMAT0012124
Sequence 
0- CACUGGAAGGUUUGGUUUAGCU -22
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Mature sequence

Sme-Mir-750_3p
mirBase accessionMIMAT0004017
Sequence 
47- UCAGAUCUAACUCUUCCAGUUCU -70
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