| MirGeneDB ID | Obi-Mir-750 |
|---|
| Family name |
MIR-750 (all species) |
|---|
| Seed |
CAGAUCU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-750
Asu-Mir-750
Bge-Mir-750
Bpl-Mir-750
Cgi-Mir-750
Csc-Mir-750-P8
Csc-Mir-750-P9
Cte-Mir-750
Dma-Mir-750
Dpu-Mir-750
Efe-Mir-750-P1
Efe-Mir-750-P2
Efe-Mir-750-P3
Esc-Mir-750
Hme-Mir-750
Isc-Mir-750
Lan-Mir-750
Lgi-Mir-750
Lpo-Mir-750-P5
Lpo-Mir-750-P6
Lpo-Mir-750-P7
Npo-Mir-750
Ovu-Mir-750
Sme-Mir-750
Tca-Mir-750
|
|---|
| Node of Origin (locus) |
Protostomia
|
|---|
| Node of Origin (family) |
Protostomia
|
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Genome context
(PRJNA270931_OBI) |
KQ418368: 17858-17920 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAUGUUGCUAUUGAUAAAGCCAUGCCUGUGCGUUGGAAGGUUAGGUUUUCGCACAUAGUUUAGCCUGUUGCCAGAUCUAACUCUUCCAGCUCAUAGUUGUGGGGUACAGCAGCAGUAGCAGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAUGUUGCUAUUGAUAAAG-- GC C -| UC CAUAGUU
CCAU CUGUG GUUGGAAG GUUAGGUUU GCA \
GGUG GAUAC CGACCUUC CAAUCUAGA CGU U
UCGACGAUGACGACGACAUGG UU U U^ C- UGUCCGA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-750_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGUUGGAAGGUUAGGUUUUCGCA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-750_3p |
| mirBase accession | None |
|---|
| Sequence |
40- CCAGAUCUAACUCUUCCAGCUCA -63
Get sequence
|
|---|
