MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-87-P2

Family name MIR-87 (all species)
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-87
Paralogues
Orthologues Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)		 supercont1.360: 1010798-1010867 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
AAUGCAACGGAAAACCAGAUUGUCACUGGCCAGCCUGAAAUUUGCUAAACCUGUGUGUAUUUGAUUCAAACAAUCAAGGUGAGCAAAUUUUCAGGUGUGUCGGAGAACAAUCGCAAUCAUCGUGGGUGUG
Get precursor sequence
Structure
        10         20         30         40        50        60    
AAUGCAACGGAAAACCA-     -  A     CA     -|        AA    GUGUGUAUUUG 
                  GAUUG UC CUGGC  GCCUG AAAUUUGCU  ACCU           A
                  CUAAC AG GGCUG  UGGAC UUUAAACGA  UGGA           U
GUGUGGGUGCUACUAACG     A  A     UG     U^        G-    ACUAACAAACU 
.       120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ge Ge So So To To To
Star sequence

Aae-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CAGCCUGAAAUUUGCUAAACCU -22
Get sequence
Mature sequence

Aae-Mir-87-P2_3p
mirBase accessionMIMAT0014252
Sequence 
48- GUGAGCAAAUUUUCAGGUGUGU -70
Get sequence