MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-87-P2

Family name MIR-87 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01000460: 49823-49883 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2)		 Mir-87-P1 LFEI01000460: 49414-49469 [+] Ensembl
Mir-87-P2 LFEI01000460: 49823-49883 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
UGAGGUAAAAGAUACAACCUUGAUGGAAGCCCGUCUGAAAUUUGUGCUCAGGCCUGUUUCUAUGACUAGGUGAGCAAAGUUUCAGGUGUGUUGCCGUCUGAGGGAGAGCAGCAGCUGUCUA
Get precursor sequence
Structure
        10         20         30        40        50        60
UGAGGUAAAAGAUACAA-    -|    A   C GU         G      GGCCUGUUU 
                  CCUU GAUGG AGC C  CUGAAAUUU UGCUCA         C
                  GGAG CUGCC UUG G  GACUUUGAA ACGAGU         U
AUCUGUCGACGACGAGAG    U^    G   U UG         -      GGAUCAGUA 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Lan-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CCGUCUGAAAUUUGUGCUCAGGC -23
Get sequence
Mature sequence

Lan-Mir-87-P2_3p
mirBase accessionNone
Sequence 
39- GUGAGCAAAGUUUCAGGUGUGU -61
Get sequence