MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-87-P2

Family name MIR-87 (all species)
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000007.1: 15863508-15863564 [-]
Clustered miRNAs
(< 50kb from Mir-87-P2)		 Mir-87-P2 CAIIXF020000007.1: 15863508-15863564 [-]
Mir-87-P1 CAIIXF020000007.1: 15864089-15864146 [-]
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
CUGAAAUAAGGAGUAAGCAUGUUGCCCAGCCAGCCUGGAAUUUGGCUCAACCUUGAUAUUGAUAGGUGAGCAAAGUUUCAGGUGUGUUGGUUGACUACAUAUCUACAGAACGAUAGA
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Structure
        10        20          30        40        50        
CUGAAAUAAGGAGUAAGCAU--|  GC     CA           G     A   UGAU 
                      GUU  CCAGC  GCCUGGAAUUU GCUCA CCU    A
                      CAG  GGUUG  UGGACUUUGAA CGAGU GGA    U
AGAUAGCAAGACAUCUAUACAU^  UU     UG           A     -   UAGU 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Ofu-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CAGCCUGGAAUUUGGCUCAACCU -23
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Mature sequence

Ofu-Mir-87-P2_3p
mirBase accessionNone
Sequence 
35- GUGAGCAAAGUUUCAGGUGUGU -57
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