MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-87-P2l

Family name MIR-87 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Csc-Mir-87-P2k 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384506.1: 706960-707019 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2l)		 Mir-87-P1l NW_019384506.1: 706723-706782 [+] Ensembl
Mir-87-P2l NW_019384506.1: 706960-707019 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
UUUUGGAUGAUGAUGUCUUGUUCUCUUUGUCCACCUGAAAGGUUGUCUCAACCUUGAGAAAGAAAUAGGUGAGCAAAGUUUCAGGUGUGUAGAUGGAGCAGACUAACUUCAAAUGCAACA
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Structure
        10          20        30        40        50        60
UUUUGGAUGAUGAUGUC--|      C    UC         GG   U    A   UGAGA 
                   UUGUUCU UUUG  CACCUGAAA  UUG CUCA CCU     A
                   GACGAGG AGAU  GUGGACUUU  AAC GAGU GGA     A
ACAACGUAAACUUCAAUCA^      U    GU         GA   -    -   UAAAG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-87-P2l_5p*
mirBase accessionNone
Sequence 
0- CCACCUGAAAGGUUGUCUCAACCU -24
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Mature sequence

Csc-Mir-87-P2l_3p
mirBase accessionNone
Sequence 
38- GUGAGCAAAGUUUCAGGUGUGU -60
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