MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-87-P1k1

Family name MIR-87 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Csc-Mir-87-P2k  Csc-Mir-87-P2l 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384773.1: 172192-172253 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P1k1)		 Mir-87-P2k NW_019384773.1: 171965-172023 [-] Ensembl
Mir-87-P1k1 NW_019384773.1: 172192-172253 [-] Ensembl
Seed UGCCUGG
Precursor
(pre-Mir +30nt flank)		 
AUAUAUUUAUUUUAAAAAUGUGUCCCUAGUGUGCCUGGAACUUUGUCUCAACCUGAACAAUUAGGUACAGGUGAGCAAAGUUUCAGGUGUGUUAGGCCCACAUGUAGUACAUCUCACGAUUU
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Structure
        10          20        30        40        50        60 
AUAUAUUUAUUUUAAAA--|    UC     UG              U    A   GAACAA 
                   AUGUG  CCUAG  UGCCUGGAACUUUG CUCA CCU      U
                   UACAC  GGAUU  GUGGACUUUGAAAC GAGU GGA      U
UUUAGCACUCUACAUGAUG^    CC     GU              -    -   CAUGGA 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-87-P1k1_5p
mirBase accessionNone
Sequence 
0- GUGCCUGGAACUUUGUCUCAACCU -24
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Star sequence

Csc-Mir-87-P1k1_3p*
mirBase accessionNone
Sequence 
40- GUGAGCAAAGUUUCAGGUGUGU -62
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