MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-87-o2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-233
Paralogues Cbr-Mir-87-o1 
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cel-Mir-87-o2  Cgi-Mir-87-P2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Tca-Mir-87-P2 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Protostomia
Genome context
(CB4)		 X: 1737042-1737108 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAUAACUGAAAUAAGCAUUUUUCUGUCCCGCGCAUCCCUUUGUUCCAAUAUUCAAACCAGUAGAAAGAUUAUUGAGCAAUGCGCAUGUGCGGGACAGAUUGAAUAGCUGACAUAUCGACCCAGG
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Structure
        10         20         30        40         50        60   
GAAAAUAACUGAAAUAAGC-    U-              CCCU-|     C    UUCAAACCA 
                    AUUU  UCUGUCCCGCGCAU     UUGUUC AAUA         \
                    UAAG  AGACAGGGCGUGUA     AACGAG UUAU         G
GGACCCAGCUAUACAGUCGA    UU              CGCGU^     -    UAGAAAGAU 
     120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-87-o2_5p*
mirBase accessionNone
Sequence 
0- CCGCGCAUCCCUUUGUUCCAAUA -23
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Mature sequence

Cbr-Mir-87-o2_3p
mirBase accessionMIMAT0000498
Sequence 
44- UUGAGCAAUGCGCAUGUGCGGGA -67
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