MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-87-P2j

Family name MIR-87 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013802694.1: 1353-1412 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
AUAUUAUACCGACAGCUGCUUGCAGCCUGUACACCUGAAUAAUUGUCUCAACCUGUAGUUUUAACCAGGUGAGCAAAGUUUCAGGUGUGCUUACAGCAAGUACUAGUUCCUCCUUUCUUU
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Structure
        10          20        30        40        50        60
AUAUUAUACCGACAGCU--|     AGCCU           UAA   U    A   GUAGU 
                   GCUUGC     GUACACCUGAA   UUG CUCA CCU     U
                   UGAACG     CGUGUGGACUU   AAC GAGU GGA     U
UUUCUUUCCUCCUUGAUCA^     ACAUU           UGA   -    -   CCAAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-87-P2j_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACACCUGAAUAAUUGUCUCAACCU -24
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Mature sequence

Lpo-Mir-87-P2j_3p
mirBase accessionNone
Sequence 
38- GUGAGCAAAGUUUCAGGUGUGC -60
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