MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-87-P1d

Family name MIR-87 (all species)
Seed UGAGCAA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-87-P1c  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Cgi-Mir-87-P1  Cte-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665817.1: 444807-444867 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUGUUUUACAAAGUUCUGCCAGGCUGCUGUGCCUGAAAUCUUGUCUCAACCUAAUUAACUUGUAGAGGUGAGCAAAGUUUCAGGUGUGUCAACUUGGAGAGACAAUCAGAAGGAAGUAG
Get precursor sequence
Structure
        10           20        30        40        50        60 
CAAUGUUUUACAAAGUU---| G     C  C  UG       UC   U    A   AAUUAA 
                    CU CCAGG UG UG  CCUGAAA  UUG CUCA CCU      \
                    GA GGUUC AC GU  GGACUUU  AAC GAGU GGA      C
GAUGAAGGAAGACUAACAGA^ -     A  U  GU       GA   -    -   GAUGUU 
 .       110       100         90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-87-P1d_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUGAAAUCUUGUCUCAACCU -24
Get sequence
Mature sequence

Lpo-Mir-87-P1d_3p
mirBase accessionNone
Sequence 
39- GUGAGCAAAGUUUCAGGUGUGU -61
Get sequence