MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-87-P2d

Family name MIR-87 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Lpo-Mir-87-P2c  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665817.1: 452773-452833 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2d)		 Mir-87-P1d NW_013665817.1: 444807-444867 [+] Ensembl
Mir-87-P2d NW_013665817.1: 452773-452833 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
UCAACAGAUAGUUCACAACCUGCCACAUGUACACCUGAAAGAUUGUCUCAACCUGUCAGUUACAACAAGGUGAGCAAAGUUUCAGGUGUGUAAGCUGCAGGACCCAAUCAGCCUGUACCGU
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Structure
        10          20        30        40        50        60 
UCAACAGAUAGUUCACAA--|    CACA             GA   U    A   GUCAGU 
                    CCUGC    UGUACACCUGAAA  UUG CUCA CCU      \
                    GGACG    AUGUGUGGACUUU  AAC GAGU GGA      U
UGCCAUGUCCGACUAACCCA^    UCGA             GA   -    -   ACAACA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-87-P2d_5p*
mirBase accessionNone
Sequence 
0- ACACCUGAAAGAUUGUCUCAACCU -24
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Mature sequence

Lpo-Mir-87-P2d_3p
mirBase accessionNone
Sequence 
39- GUGAGCAAAGUUUCAGGUGUGU -61
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