MirGeneDB 3.0
MirGeneDB ID

Isc-Mir-87-P2

Family name MIR-87 (all species)
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-87
Paralogues Isc-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCF_016920785.2_ASM1692078v2_ISC)		 NW_024609880.1: 72740057-72740115 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2)		 Mir-87-P2 NW_024609880.1: 72740057-72740115 [-] Ensembl
Mir-87-P1 NW_024609880.1: 72740477-72740537 [-] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
CGGUGGGCACACAUCUCGCUUCUUGACUGCCUGCCUGAAAAUUUGUCUCAAACCUUUCAUAGUGUAGGUGAGCAAAGUUUCAGGUGUGUUGUCUUGGAGGACACACUGCAUCUCUGCAA
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Structure
        10          20        30        40        50        60
CGGUGGGCACACAUCUCG--|   UU   U  C         A    U   AA    UUCA 
                    CUUC  GAC GC UGCCUGAAA UUUG CUC  ACCU    U
                    GAGG  CUG UG GUGGACUUU AAAC GAG  UGGA    A
AACGUCUCUACGUCACACAG^   UU   U  U         G    -   --    UGUG 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Sa Sa To
Star sequence

Isc-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CUGCCUGAAAAUUUGUCUCAAACCU -25
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Mature sequence

Isc-Mir-87-P2_3p
mirBase accessionMIMAT0012707
Sequence 
37- GUGAGCAAAGUUUCAGGUGUGU -59
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