MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-87-P2h

Family name MIR-87 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dmo-Mir-87-P2-v1  Dsi-Mir-87-P2-v1  Dya-Mir-87-P2-v1  Gpa-Mir-87-P2-v1  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667735.1: 133581-133641 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2h)		 Mir-87-P1h NW_013667735.1: 132492-132555 [+] Ensembl
Mir-87-P2h NW_013667735.1: 133581-133641 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
AUCUUCAUUAGUUCCUAACCUGCAGCCUAUACACCUGAAGAAUUGUCUCAACCUGUAACUUGAAGCUAGGUGAGCAAAGUUUCAGGUGUGUAGACCACAGGAAUAAGUUCUUCUUUUCUUC
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Structure
        10          20        30        40        50        60 
AUCUUCAUUAGUUCCUAA--|   CAGC              AA   U    A   GUAACU 
                    CCUG    CUAUACACCUGAAG  UUG CUCA CCU      \
                    GGAC    GAUGUGUGGACUUU  AAC GAGU GGA      U
CUUCUUUUCUUCUUGAAUAA^   ACCA              GA   -    -   UCGAAG 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-87-P2h_5p*
mirBase accessionNone
Sequence 
0- ACACCUGAAGAAUUGUCUCAACCU -24
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Mature sequence

Lpo-Mir-87-P2h_3p
mirBase accessionNone
Sequence 
39- GUGAGCAAAGUUUCAGGUGUGU -61
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