MirGeneDB ID | Aga-Mir-277 |
Family name |
MIR-277 (all species) |
Species |
African malaria mosquito (Anopheles gambiae) |
MiRBase ID |
aga-mir-277
|
Paralogues |
|
Orthologues |
Aae-Mir-277
Agr-Mir-277
Ava-Mir-277-P10
Ava-Mir-277-P11
Bge-Mir-277
Bko-Mir-277
Bpl-Mir-277
Cbr-Mir-277-P6a
Cbr-Mir-277-P6b
Cel-Mir-277
Csc-Mir-277-P18a
Csc-Mir-277-P18b
Cte-Mir-277-P1
Cte-Mir-277-P2
Dan-Mir-277
Dgr-Mir-277-P19
Dgr-Mir-277-P20
Dgr-Mir-277-P21
Dlo-Mir-277
Dma-Mir-277
Dme-Mir-277
Dmo-Mir-277
Dpu-Mir-277
Dsi-Mir-277
Dya-Mir-277
Eba-Mir-277
Efe-Mir-277
Egr-Mir-277-P7
Egr-Mir-277-P8
Egr-Mir-277-P9
Esc-Mir-277
Gpa-Mir-277
Gsa-Mir-277-P8
Gsa-Mir-277-P9
Gsp-Mir-277
Hme-Mir-277
Hru-Mir-277
Isc-Mir-277
Lan-Mir-277-P3
Lan-Mir-277-P4
Lan-Mir-277-P5
Lgi-Mir-277
Llo-Mir-277
Lpo-Mir-277-P12
Lpo-Mir-277-P13
Lpo-Mir-277-P14
Lpo-Mir-277-P15
Lpo-Mir-277-P16
Lpo-Mir-277-P17
Mgi-Mir-277
Mom-Mir-277
Npo-Mir-277
Obi-Mir-277
Ofu-Mir-277-P22
Ofu-Mir-277-P23
Ovu-Mir-277
Pau-Mir-277
Pca-Mir-277
Pcr-Mir-277
Pdu-Mir-277
Pve-Mir-277
Rph-Mir-277
Sma-Mir-277-P7
Sma-Mir-277-P8
Sme-Mir-277-P7a
Sme-Mir-277-P7b
Sme-Mir-277-P8a
Sme-Mir-277-P8b
Sne-Mir-277
Snu-Mir-277
Tca-Mir-277
Tur-Mir-277
War-Mir-277
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 28080086-28080155 [-]
Ensembl
|
Clustered miRNAs (< 50kb from Mir-277) |
Mir-34
NC_064601.1: 28078231-28078294 [-]
Ensembl
Mir-277
NC_064601.1: 28080086-28080155 [-]
Ensembl
Mir-317
NC_064601.1: 28097557-28097624 [-]
Ensembl
|
Seed |
AAAUGCA |
Precursor (pre-Mir +30nt flank) |
CUUUCUCCAUUCUUCCUGAGUUUUGGGGUACGUGUCAGAGGUGCAUUUACAUCGAACUAUUCCAGUUGAGGUAUUUGUAAAUGCACUAUCUGGUACGACAUUCCAGAAUCGAUAAUCGACGAGCGAGAAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUUUCUCCAUUCUUCCU--- G A- GU -| UCGAACUAUUC
GA UUUUGGGGU CGU CAGA GGUGCAUUUACA C
CU AAGACCUUA GCA GUCU UCACGUAAAUGU A
AAAGAGCGAGCAGCUAAUAG - CA UG A^ UUAUGGAGUUG
. 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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|
Star sequence |
Aga-Mir-277_5p* |
mirBase accession | None |
Sequence |
0- CGUGUCAGAGGUGCAUUUACA -21
Get sequence
|
Mature sequence |
Aga-Mir-277_3p |
mirBase accession | MIMAT0001510 |
Sequence |
47- UAAAUGCACUAUCUGGUACGACA -70
Get sequence
|