MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-277-P8

Family name MIR-277 (all species)
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-277a
Paralogues Egr-Mir-277-P7  Egr-Mir-277-P9 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsa-Mir-277-P8  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sma-Mir-277-P8  Sme-Mir-277-P8a  Sme-Mir-277-P8b  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) Tricladida + Neodermata
Node of Origin (family) Protostomia
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000001.1: 2377323-2377401 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-277-P8)		 Mir-277-P7 APAU02000001.1: 2377193-2377267 [+] UCSC Ensembl
Mir-277-P8 APAU02000001.1: 2377323-2377401 [+] UCSC Ensembl
Seed AAAUGCA
Precursor
(pre-Mir +30nt flank)		 
AUUUUACAUACCCCCUCUUGCUCAUAGGUGGUGGGUAGAAAGUGCCUUUUACAACAUGCUGCCUCUAUGAGAUCCACUUAUGUUUGUAAAUGCAUUUUCUGGCCCGUAACCUUGAGCAAUUGAACUGCAUAAUUGUGAG
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Structure
        10           20        30         40        50        60         
AUUUUACAUACCCCCUC---|      U    GG     -         CU      ACAUGCUGCCUCUAU 
                    UUGCUCA AGGU  UGGGU AGAAAGUGC  UUUACA               \
                    AACGAGU UCCA  GCCCG UCUUUUACG  AAAUGU               G
GAGUGUUAAUACGUCAAGUU^      -    AU     G         U-      UUGUAUUCACCUAGA 
       130       120        110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-277-P8_5p*
mirBase accessionNone
Sequence 
0- GUGGGUAGAAAGUGCCUUUUACA -23
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Mature sequence

Egr-Mir-277-P8_3p
mirBase accessionMIMAT0020247
Sequence 
56- UAAAUGCAUUUUCUGGCCCGUAA -79
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