MirGeneDB 2.1

MirGeneDB ID

Aae-Mir-277

Family name MIR-277 (all species)
Seed AAAUGCA
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-277
Paralogues
Orthologues Bge-Mir-277  Bpl-Mir-277  Cbr-Mir-277-P6a  Cbr-Mir-277-P6b  Cel-Mir-277  Cgi-Mir-277  Csc-Mir-277-P18a  Csc-Mir-277-P18b  Cte-Mir-277-P1  Cte-Mir-277-P2  Dan-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Efe-Mir-277  Esc-Mir-277  Hme-Mir-277  Isc-Mir-277  Lan-Mir-277-P3  Lan-Mir-277-P4  Lan-Mir-277-P5  Lgi-Mir-277  Lpo-Mir-277-P12  Lpo-Mir-277-P13  Lpo-Mir-277-P14  Lpo-Mir-277-P15  Lpo-Mir-277-P16  Lpo-Mir-277-P17  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Sme-Mir-277-P6a  Sme-Mir-277-P6b  Sme-Mir-277-P7a  Sme-Mir-277-P7b  Tca-Mir-277 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)
supercont1.265: 508812-508882 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-277)
Mir-277 supercont1.265: 508812-508882 [+] Ensembl
Mir-34 supercont1.265: 509536-509636 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCGACGGCCGAAACUUAGUUUUGGAGUGCGUGUCAGAAGUGCAUUUACAUAGGUAUUUCCCGUUUAGCAGUAUUUGUAAAUGCACUAUCUGGUACGACAUUCCAGAAUCAACAAUCAUCCAGAGAGGGG
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Structure
        10          20        30          40        50        60    
AGGCGACGGCCGAAACUUA--           -   GU    -|           UAGGUAUUUCCC 
                     GUUUUGGAGUG CGU  CAGA AGUGCAUUUACA            \
                     UAAGACCUUAC GCA  GUCU UCACGUAAAUGU            G
GGGGAGAGACCUACUAACAAC           A   UG    A^           UUAUGACGAUUU 
 .       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Aae-Mir-277_5p*

mirBase accessionMIMAT0014210
Sequence
0- CGUGUCAGAAGUGCAUUUACA -21
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Mature sequence

Aae-Mir-277_3p

mirBase accessionMIMAT0014211
Sequence
48- UAAAUGCACUAUCUGGUACGACA -71
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