MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-277-P16

Family name MIR-277 (all species)
Seed AAAUGCA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-277-P12  Lpo-Mir-277-P13  Lpo-Mir-277-P14  Lpo-Mir-277-P15  Lpo-Mir-277-P17 
Orthologues Aae-Mir-277  Bge-Mir-277  Bpl-Mir-277  Cel-Mir-277  Cgi-Mir-277  Dan-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Efe-Mir-277  Esc-Mir-277  Hme-Mir-277  Isc-Mir-277  Lgi-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Tca-Mir-277 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668400.1: 23780-23838 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CACUUUAACCCUGCAUGACCUACGUAGUCUCAUUCCAGCGGUGCGUUUACACGUCCUGAUACAUCUGUAAAUGCAUCAUCUGGAAUGAAGGUAUGACCUGGUCUUUUCUUCACUUACAC
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Structure
        10        20           30         40        50        
CACUUUAACCCUGCAUGA  UA--    G  -         C-|           CGUCCU 
                  CC    CGUA UC UCAUUCCAG  GGUGCGUUUACA      G
                  GG    GUAU GG AGUAAGGUC  CUACGUAAAUGU      A
CACAUUCACUUCUUUUCU  UCCA    -  A         UA^           CUACAU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-277-P16_5p*
mirBase accessionNone
Sequence 
0- CAUUCCAGCGGUGCGUUUACA -21
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Mature sequence

Lpo-Mir-277-P16_3p
mirBase accessionNone
Sequence 
37- UAAAUGCAUCAUCUGGAAUGAA -59
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