MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-277-P22

Family name MIR-277 (all species)
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-277-P23 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Protostomia
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000010.1: 35255866-35255921 [-]
Clustered miRNAs
(< 50kb from Mir-277-P22)		 Mir-34 CAIIXF020000010.1: 35250862-35250920 [-]
Mir-277-P23 CAIIXF020000010.1: 35254985-35255041 [-]
Mir-277-P22 CAIIXF020000010.1: 35255866-35255921 [-]
Mir-317 CAIIXF020000010.1: 35268805-35268865 [-]
Seed AAAUGCA
Precursor
(pre-Mir +30nt flank)		 
AUGUGAUCAAAGAUGAUGAGUUGUAUGACUCAUAUCAGAAGGUACAUUUACAGUGAUAUAGUUGCAAAUGCAUCUACUGGUAUGUGUUAUGCUACUUACAGAAAUUAGUUAUUAUG
Get precursor sequence
Structure
        10          20        30        40        50       
AUGUGAUCAAAGAUGAU--|   U       U        A    A     A  GUGA 
                   GAGU GUAUGAC CAUAUCAG AGGU CAUUU CA    U
                   UUCA CGUAUUG GUAUGGUC UCUA GUAAA GU    A
GUAUUAUUGAUUAAAGACA^   U       U        A    C     C  UGAU 
    110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
- +
Ow Ow
Star sequence

Ofu-Mir-277-P22_5p*
mirBase accessionNone
Sequence 
0- CAUAUCAGAAGGUACAUUUACA -22
Get sequence
Mature sequence

Ofu-Mir-277-P22_3p
mirBase accessionNone
Sequence 
34- CAAAUGCAUCUACUGGUAUGUG -56
Get sequence