| MirGeneDB ID | Dgr-Mir-10-P4 |
|---|---|
| Family name | MIR-10 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-10-P1 Dgr-Mir-10-P2 Dgr-Mir-10-P3w Dgr-Mir-10-P3x Dgr-Mir-10-P3y Dgr-Mir-10-P7 |
| Orthologues | Aae-Mir-10-P4 Adi-Mir-10 Aga-Mir-10-P4 Asp-Mir-10 Asu-Mir-10-P4 Ava-Mir-10-P4 Bge-Mir-10-P4 Bko-Mir-10-P4o1 Bko-Mir-10-P4o2 Bpl-Mir-10-P4 Csc-Mir-10-P4q Csc-Mir-10-P4r Cte-Mir-10-P4 Dan-Mir-10-P4 Dlo-Mir-10-P4-v1 Dma-Mir-10-P4 Dme-Mir-10-P4 Dmo-Mir-10-P4 Dpu-Mir-10-P4 Dsi-Mir-10-P4 Dya-Mir-10-P4 Efe-Mir-10-P4a Efe-Mir-10-P4b Efe-Mir-10-P4c Gpa-Mir-10-P4 Gsa-Mir-10-P4 Hme-Mir-10-P4 Isc-Mir-10-P4 Lan-Mir-10-P4d Lan-Mir-10-P4e Llo-Mir-10-P4-v1 Lpo-Mir-10-P4j Lpo-Mir-10-P4k Lpo-Mir-10-P4l Lpo-Mir-10-P4m Lpo-Mir-10-P4n Nve-Mir-10 Ofu-Mir-10-P4 Pca-Mir-10-P4 Pcr-Mir-10-P4s1 Pcr-Mir-10-P4s2 Pcr-Mir-10-P4t Pdu-Mir-10-P4 Pdu-Mir-10-P4-as Snu-Mir-10-P4 Tca-Mir-10-P4 Tur-Mir-10-P4u Tur-Mir-10-P4v Tur-Mir-10-P4w |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Eumetazoa |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000018.1: 613463-613521 [-] |
| Clustered miRNAs (< 50kb from Mir-10-P4) |
Mir-10-P7
CAJFCJ010000018.1: 579676-579735 [+]
Mir-10-P1 CAJFCJ010000018.1: 600310-600365 [+] Mir-10-P4 CAJFCJ010000018.1: 613463-613521 [-] |
| Seed | GAAGCUC |
| Precursor (pre-Mir +30nt flank) |
AACUCCAGAUAAUUUUGCAUCCUUAUUUAGACCCUGUAGAUCCGGGUUUAUGUCAGAAAAAAGAGGCAGAAGCUCGAUUCUACAGGUAUAAAAAGAAUGCUCAUUCGACCAUUCCUUCUGet precursor sequence |
| Structure | 10 20 30 40 50 AACUCCAGAUAAUUUUG---| C A GAC UC A CAGAA CAU CUU UUUA CCUGUAGA CGGGUUU UGU A GUA GAA AAAU GGACAUCU GCUCGAA ACG A UCUUCCUUACCAGCUUACUC^ A - AU- UA G GAGAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Dgr-Mir-10-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACCCUGUAGAUCCGGGUUUAUGU -23
Get sequence
|
| Mature sequence | Dgr-Mir-10-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AGAAGCUCGAUUCUACAGGUAU -59
Get sequence
|
