MirGeneDB 2.1
MirGeneDB ID

Isc-Mir-10-P4

Family name MIR-10 (all species)
Seed AAGCUCG
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-993
Paralogues Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Isc-Mir-10-P2  Isc-Mir-10-P3 
Orthologues Aae-Mir-10-P4  Asu-Mir-10-P4  Bge-Mir-10-P4  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Hme-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Tca-Mir-10-P4 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(IscaWI)		 DS891538: 3285829-3285894 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCACAUUUUACACGAGCCCUUCGUAAUCUACCCUGUAGAACCGGGCUUUUGUAGACUAGCGACCCUUUCAGAAGCUCGUUUCUACAGGUAUCUUGCGAAAUCAGCUGCCUGCGGCUAGAAACA
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Structure
        10        20          30        40        50        60   
GCAGCACAUUUUACACGA  CC--|      UC    C       C          UAGACUAG 
                  GC    UUCGUAA  UACC UGUAGAA CGGGCUUUUG        \
                  CG    AAGCGUU  AUGG ACAUCUU GCUCGAAGAC        C
ACAAAGAUCGGCGUCCGU  ACUA^      CU    -       U          UUUCCCAG 
    120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Al Mi Mi Mi Sa Sa Sa Sa To
Star sequence

Isc-Mir-10-P4_5p*
mirBase accessionNone
Sequence 
0- CUACCCUGUAGAACCGGGCUUUUG -24
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Mature sequence

Isc-Mir-10-P4_3p
mirBase accessionMIMAT0012709
Sequence 
43- GAAGCUCGUUUCUACAGGUAUCU -66
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