MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-10-P4d

Family name MIR-10 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-10-P1u  Lan-Mir-10-P1v  Lan-Mir-10-P2  Lan-Mir-10-P3  Lan-Mir-10-P4e 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bpl-Mir-10-P4  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Llo-Mir-10-P4-v1  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4 
Node of Origin (locus) L. anatina
Node of Origin (family) Eumetazoa
Genome context
(LinAna_1.0)		 LFEI01000928: 43692-43749 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P4d)		 Mir-10-P1v LFEI01000928: 12730-12787 [+] Ensembl
Mir-10-P4d LFEI01000928: 43692-43749 [-] Ensembl
Seed GAAGCUC
Precursor
(pre-Mir +30nt flank)		 
AGAUGGGAGAGGACGUUACCCGCUGAAUGCACCCUGUAGUUUCGGGUUUGUGUUUACAUUGGGGUACAGAAGCUCGAUUCUACAGGUUCAUUUGAAGGGGACAAACACCAUACCAGAG
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Structure
        10         20        30        40        50         
AGAUGGGAGAGGACGUUA-|  GC      CAC       UU        G  UUUACA 
                   CCC  UGAAUG   CCUGUAG  UCGGGUUU UG      U
                   GGG  GUUUAC   GGACAUC  AGCUCGAA AC      U
GAGACCAUACCACAAACAG^  AA      UU-       UU        G  AUGGGG 
      110       100        90         80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Lan-Mir-10-P4d_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUGUAGUUUCGGGUUUGUG -22
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Mature sequence

Lan-Mir-10-P4d_3p
mirBase accessionNone
Sequence 
37- AGAAGCUCGAUUCUACAGGUU -58
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