MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-10-P4

Family name MIR-10 (all species)
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-10-P1-v1  Dma-Mir-10-P2  Dma-Mir-10-P3 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bko-Mir-10-P4o1  Bko-Mir-10-P4o2  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Llo-Mir-10-P4-v1  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(DMA_ASM399081)		 LRGB01000810.1: 3483-3547 [+] Ensembl
Seed UACCCUG
Precursor
(pre-Mir +30nt flank)		 
CCAUUCUAUUUCAACAGCCGGAUUCGUAACCUACCCUGUAGCUCCGGGCUUUUGUUUCGUUUCUAGUAAUCAGAAGCUCGUUUCUACAGGUAUCUUACGGGUAAAGAAAAAAAAAAAAGAGGAUA
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Structure
        10        20          30        40        50        60  
CCAUUCUAUUUCAACAGCCGG--|       CC    C     CUC          UUUCGUU 
                       AUUCGUAA  UACC UGUAG   CGGGCUUUUG       U
                       UGGGCAUU  AUGG ACAUC   GCUCGAAGAC       C
AUAGGAGAAAAAAAAAAAAGAAA^       CU    -     UUU          UAAUGAU 
   120       110       100        90         80        70
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsNo
Tissue expression
- +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Mir-10-P4_5p
mirBase accessionNone
Sequence 
0- CUACCCUGUAGCUCCGGGCUUUUG -24
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Star sequence

Dma-Mir-10-P4_3p*
mirBase accessionNone
Sequence 
42- GAAGCUCGUUUCUACAGGUAUCU -65
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