MirGeneDB 3.0
76 Daphnia magna microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC 01 02 03 04 05 06 07 08 09 10 11 12 13 14
Dma-Bantam None BANTAM GAGAUCA None None NC_046176.1 6757482 6757544 - Protostomia Protostomia No
Dma-Iab-4 None IAB-4 CGUAUAC None None NC_046178.1 8042710 8042767 - Arthropoda Arthropoda Unknown 1
Dma-Let-7 None LET-7 GAGGUAG None None NW_022656250.1 895 1062 - Bilateria Bilateria No 1
Dma-Mir-1 None MIR-1 GGAAUGU None None NC_046176.1 5279564 5279624 - Bilateria Bilateria No 1
Dma-Mir-2-o2 None MIR-2 GAUAAUU None None NC_046178.1 1060033 1060091 - Daphnia Protostomia No 1
Dma-Mir-2-P1 None MIR-2 AUCACAG None None NC_046175.1 11973585 11973670 + Arthropoda Protostomia No
Dma-Mir-2-P2 None MIR-2 AUCACAG None None NC_046175.1 11973770 11973832 + Pancrustacea Protostomia No
Dma-Mir-2-P3 None MIR-2 AUCACAG None None NC_046175.1 11973888 11973956 + Arthropoda Protostomia No
Dma-Mir-2-P4 None MIR-2 UUGUCAG None None NC_046175.1 11974083 11974146 + Arthropoda Protostomia No 1 1
Dma-Mir-2-P5 None MIR-2 AUCACAG None None NC_046175.1 6286723 6286816 - Pancrustacea Protostomia No
Dma-Mir-3 None MIR-3 CACUGGG None None NC_046174.1 2509456 2509516 + Pancrustacea Pancrustacea No 1
Dma-Mir-7 None MIR-7 GGAAGAC None None LRGB01002190.1 1222125 1222188 + Bilateria Bilateria No 1
Dma-Mir-8 None MIR-8 AAUACUG None None NC_046181.1 5200844 5200917 - Nephrozoa Nephrozoa No 1 1
Dma-Mir-9-P9 None MIR-9 CUUUGGU None None NC_046175.1 6286883 6286941 - Pancrustacea Bilateria No 1
Dma-Mir-9-P10 None MIR-9 CUUUGGU None None NC_046179.1 9004931 9004991 - Pancrustacea Bilateria No 1 1 1
Dma-Mir-10-P1 V None MIR-10 CCCUGUA None None NC_046178.1 8231923 8231981 + Bilateria Eumetazoa 2 No 1
Dma-Mir-10-P2 None MIR-10 ACCCGUA None None NW_022656250.1 1195 1271 - Bilateria Eumetazoa No 1
Dma-Mir-10-P3 None MIR-10 CCCUGAG None None NC_046176.1 1107561 1107623 - Bilateria Eumetazoa No 1 1
Dma-Mir-10-P4 None MIR-10 UACCCUG None None LRGB01000810.1 3483 3547 + Protostomia Eumetazoa No
Dma-Mir-12 None MIR-12 GAGUAUU None None NC_046176.1 6126792 6126852 + Protostomia Protostomia No 1 1
Dma-Mir-22-P2 None MIR-22 GGUCCUU None None NC_046182.1 3088010 3088075 + Bilateria Bilateria No 1
Dma-Mir-29-P1 None MIR-29 AGCACCA None None NC_046176.1 6642439 6642506 - Bilateria Bilateria No
Dma-Mir-29-P2 None MIR-29 CUGAGUC None None NC_046175.1 6286592 6286666 - Bilateria Bilateria No
Dma-Mir-31 None MIR-31 GGCAAGA None None NC_046175.1 12368730 12368791 - Bilateria Bilateria No
Dma-Mir-33 None MIR-33 AAUGCUU None None NC_046176.1 364079 364144 + Bilateria Bilateria No 1
Dma-Mir-34 None MIR-34 GGCAGUG None None NC_046180.1 8462568 8462635 + Bilateria Bilateria No
Dma-Mir-36 None MIR-36 CACCGGG None None NC_046175.1 6285796 6285856 - Protostomia Protostomia No 1
Dma-Mir-67 None MIR-67 CUCGUUC None None NC_046175.1 1203701 1203791 + Protostomia Protostomia No 1
Dma-Mir-71 None MIR-71 GAAAGAC None None NC_046175.1 11973451 11973516 + Nephrozoa Nephrozoa No
Dma-Mir-76 None MIR-76 UCGUUGU None None NC_046179.1 9483697 9483755 + Nephrozoa Nephrozoa No 1
Dma-Mir-87-o5a None MIR-87 UGAGCAA None None NC_046176.1 6157349 6157434 - Daphnia Protostomia No 1
Dma-Mir-87-o5b None MIR-87 UGAGCAA None None NC_046176.1 6157168 6157231 - Daphnia Protostomia No 1
Dma-Mir-92-P3 None MIR-92 AUUGCAC None None NC_046181.1 7370656 7370733 - Pancrustacea Bilateria No 1
Dma-Mir-92-P4 None MIR-92 AUUGCAC None None NC_046181.1 7370498 7370557 - Pancrustacea Bilateria No
Dma-Mir-96-P2 V None MIR-96 UUGGCAC None None NC_046180.1 10114057 10114119 - Bilateria Bilateria 2 No 1
Dma-Mir-96-P3 None MIR-96 AUGGCAC None None NC_046180.1 10114339 10114567 - Bilateria Bilateria No 1 1
Dma-Mir-124 None MIR-124 GUGUUCA None None NC_046174.1 10808865 10808927 + Bilateria Bilateria No 1
Dma-Mir-133 None MIR-133 UGGUCCC None None NC_046176.1 5268647 5268711 - Bilateria Bilateria No 1 1
Dma-Mir-137 None MIR-137 UAUUGCU None None NC_046175.1 2231788 2231849 - Bilateria Bilateria No 1
Dma-Mir-153 None MIR-153 UGCAUAG None None NC_046175.1 7410422 7410486 + Bilateria Bilateria No
Dma-Mir-184 None MIR-184 GGACGGA None None NC_046174.1 2565658 2565755 + Nephrozoa Nephrozoa No 1
Dma-Mir-190 None MIR-190 GAUAUGU None None NC_046175.1 13045650 13045714 + Bilateria Bilateria No 1
Dma-Mir-193-P1 None MIR-193 GGGAUUU None None NC_046179.1 6292295 6292353 + Bilateria Bilateria No
Dma-Mir-210 None MIR-210 GCUGCUG None None NC_046183.1 6424782 6424857 + Bilateria Bilateria No 1
Dma-Mir-216-P1 None MIR-216 AAUAUCA None None NC_046176.1 6125840 6125925 + Nephrozoa Nephrozoa No 1
Dma-Mir-216-P2 None MIR-216 AAUCUCA None None NC_046176.1 6126328 6126441 + Nephrozoa Nephrozoa Yes 1
Dma-Mir-219 None MIR-219 GAAAUGU None None NC_046182.1 5147273 5147333 - Bilateria Bilateria No 1 1
Dma-Mir-252-P1 None MIR-252 UAAGUAG None None NC_046174.1 12626051 12626115 - Bilateria Bilateria No 1 1
Dma-Mir-252-P2 V None MIR-252 UAAGUAC None None NC_046174.1 8936495 8936562 - Bilateria Bilateria 2 No 1
Dma-Mir-275 None MIR-275 CAGGUAC None None NC_046180.1 7554925 7554989 - Arthropoda Arthropoda No 1 1
Dma-Mir-276 None MIR-276 AGGAACU None None NC_046181.1 1531012 1531082 - Arthropoda Arthropoda No 1 1
Dma-Mir-277 None MIR-277 AAAUGCA None None NC_046180.1 8461501 8461567 + Protostomia Protostomia No 1
Dma-Mir-278 None MIR-278 CGGUGGG None None NC_046181.1 8681550 8681703 + Bilateria Bilateria No 1
Dma-Mir-279-o8 None MIR-279 GUGAGCG None None NC_046179.1 204663 204723 - Daphnia Protostomia No 1 1
Dma-Mir-279-o9 None MIR-279 GACUAGA None None NC_046182.1 2914774 2914845 + Daphnia Protostomia No
Dma-Mir-279-P1c None MIR-279 GACUAGA None None NC_046175.1 6287015 6287090 - Daphnia Protostomia No 1 1
Dma-Mir-279-P1d None MIR-279 GACUAGA None None NC_046175.1 6285937 6286000 - Daphnia Protostomia No 1
Dma-Mir-279-P2 None MIR-279 GACUAGA None None NC_046174.1 9091292 9091368 + Pancrustacea Protostomia No 1
Dma-Mir-279-P3 None MIR-279 GUGGGUC None None NC_046174.1 9091763 9091828 + Pancrustacea Protostomia No 1 1
Dma-Mir-281 None MIR-281 AGAGAGC None None NC_046174.1 7564928 7564995 + Nephrozoa Nephrozoa No 1
Dma-Mir-282 V None MIR-282 CAACGUC None None NC_046178.1 847714 847800 - Pancrustacea Pancrustacea 2 No 1 1
Dma-Mir-305 None MIR-305 UUGUACU None None NC_046180.1 7554472 7554559 - Cryptovermes Cryptovermes No
Dma-Mir-315 None MIR-315 UUUGAUU None None NC_046182.1 7284560 7284654 - Nephrozoa Nephrozoa No 1 1
Dma-Mir-317 None MIR-317 GAACACA None None NC_046180.1 8460499 8460565 + Protostomia Protostomia No
Dma-Mir-375 None MIR-375 UUGUUCG None None NC_046175.1 1628518 1628758 - Nephrozoa Nephrozoa No 1
Dma-Mir-750 None MIR-750 CAGAUCU None None NC_046176.1 1467288 1467439 + Protostomia Protostomia No 1
Dma-Mir-965 None MIR-965 AAGCGUA None None NC_046175.1 6247768 6247831 - Pancrustacea Pancrustacea No 1
Dma-Mir-1175 None MIR-1175 GAGAUUC None None NC_046176.1 1467560 1467625 + Protostomia Protostomia No 1
Dma-Mir-1993 None MIR-1993 CGUGAAU None None NC_046179.1 2555927 2555987 + Protostomia Protostomia No 1
Dma-Mir-12603 None MIR-12603 GUGAUGU None None NC_046182.1 5639526 5639593 - Daphnia Daphnia No 1 1
Dma-Mir-12604 None MIR-12604 CUGGGUU None None NC_046174.1 2509619 2509677 + Daphnia Daphnia No 1
Dma-Mir-12605 None MIR-12605 UGCACUG None None NC_046183.1 5280622 5280684 + Branchiopoda Branchiopoda No
Dma-Mir-12606 None MIR-12606 CUUGGUU None None NC_046174.1 2509231 2509290 + Daphnia Daphnia No 1 1
Dma-Mir-12607 V None MIR-12607 ACUGGGU None None NC_046174.1 2509081 2509143 + Daphnia Daphnia 2 No
Dma-Mir-12608 None MIR-12608 GGGGGAA None None NC_046175.1 6286446 6286507 - Daphnia Daphnia No
Dma-Novel-1 None DMA-NOVEL-1 CCUGUUU None None None None None None D. magna D. magna No

(red - mature/co-mature, blue - star)

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