MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-2-o2

Family name MIR-2 (all species)
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-2-P1  Dma-Mir-2-P2  Dma-Mir-2-P3  Dma-Mir-2-P4  Dma-Mir-2-P5 
Orthologues Aae-Mir-2-P2b  Aga-Mir-2-P2a  Aga-Mir-2-P2b  Bge-Mir-2-P2a  Bge-Mir-2-P2b  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Dan-Mir-2-P2a  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dlo-Mir-2-P2a  Dlo-Mir-2-P2b  Dme-Mir-2-P2a  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2a  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gsp-Mir-2  Hme-Mir-2-P2a  Hme-Mir-2-P2b  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Ple-Mir-2  Tca-Mir-2-P2a  Tca-Mir-2-P2b 
Node of Origin (locus) Daphnia
Node of Origin (family) Protostomia
Genome context
(DMA_ASM399081)		 NC_046178.1: 1060033-1060091 [-] Ensembl
Seed GAUAAUU
Precursor
(pre-Mir +30nt flank)		 
UUCAUUCUGGCUUCUGGAGUUUUUUAUUUCAGAUAAUUUUGUCUGUGAAAUGCUGUUUAUGUGACAUAUCACAGAUGCAAUUAAUCUGAAUUUUUUAGCUCAAUAACAUCCAUUAUAUC
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Structure
        10          20        30         40        50        
UUCAUUCUGGCUUCUGG--    UUUUAU      -|    U         A   CUGUU 
                   AGUU      UUCAGA UAAUU UGUCUGUGA AUG     U
                   UCGA      AAGUCU AUUAA GUAGACACU UAC     A
CUAUAUUACCUACAAUAAC    UUUUUU      A^    C         A   AGUGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Mir-2-o2_5p
mirBase accessionNone
Sequence 
0- AGAUAAUUUUGUCUGUGAAAUG -22
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Star sequence

Dma-Mir-2-o2_3p*
mirBase accessionNone
Sequence 
36- UAUCACAGAUGCAAUUAAUCUGA -59
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