MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-2-P2b

Family name MIR-2 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-13b
Paralogues Hme-Mir-2-P1-v1  Hme-Mir-2-P2a  Hme-Mir-2-P3-v1  Hme-Mir-2-P4  Hme-Mir-2-P7  Hme-Mir-2-P8 
Orthologues Aae-Mir-2-P2b  Aga-Mir-2-P2b  Bge-Mir-2-P2b  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dlo-Mir-2-P2b  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Gpa-Mir-2-P2b  Gsp-Mir-2  Ple-Mir-2  Tca-Mir-2-P2b 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Hmel_1)		 HE671256: 344775-344830 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2b)		 Mir-71 HE671256: 336024-336085 [+] Ensembl
Mir-2-P1-v2 HE671256: 344481-344540 [+] Ensembl
Mir-2-P1-v1 HE671256: 344483-344538 [+] Ensembl
Mir-2-P2a HE671256: 344637-344695 [+] Ensembl
Mir-2-P2b HE671256: 344775-344830 [+] Ensembl
Mir-2-P3-v2 HE671256: 344897-344955 [+] Ensembl
Mir-2-P3-v1 HE671256: 344898-344954 [+] Ensembl
Mir-2-P4 HE671256: 345032-345089 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AUAUAGGUAUUUGGAGAGUCUGUGGCCCAUUCGUAAAAAUGGCUGUGCCAUGGUACAUAUUCAUAUCACAGCCAUUUUUGACGAGUUGGGCUGCGGGGCAGUUCUCUGGCAUCUUA
Get precursor sequence
Structure
        10         20         30         40        50       
AUAUAGGUAUUUGGAGAG-    UG    -     -|             CC   GUAC 
                   UCUG  GCCC AUUCG UAAAAAUGGCUGUG  AUG    \
                   GGGC  CGGG UGAGC GUUUUUACCGACAC  UAC    A
AUUCUACGGUCUCUUGACG    GU    U     A^             UA   UUAU 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-2-P2b_5p*
mirBase accessionNone
Sequence 
0- UCGUAAAAAUGGCUGUGCCAUG -22
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Mature sequence

Hme-Mir-2-P2b_3p
mirBase accessionMIMAT0024941
Sequence 
33- UAUCACAGCCAUUUUUGACGAGU -56
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